Gene_Locus Report

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Gene_locus Report for: agrt5-a9cfs8

Agrobacterium tumefaciens (strain C58 / ATCC 33970) Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)) Lysophospholipase

Relationship
Family|Monoglyceridelipase_lysophospholip
Block| X
Position in NCBI Life Tree|Agrobacterium tumefaciens
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Rhizobiaceae: N E > Rhizobium/Agrobacterium group: N E > Agrobacterium: N E > Agrobacterium tumefaciens complex: N E > Agrobacterium tumefaciens: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AE007870, CP002249
2 UniProt : A9CFS8, F0LD19
2 UniProt : A9CFS8, F0LD19
2 Interpro : A9CFS8, F0LD19
2 Pfam : A9CFS8, F0LD19
2 PIRSF : A9CFS8, F0LD19
2 SUPERFAM : A9CFS8, F0LD19
Sequence
Graphical view for this peptide sequence: agrt5-a9cfs8
Colored MSA for Monoglyceridelipase_lysophospholip (raw)
MIEATLRASEDNPVPGNQTVGYFTGHGGKQLRYAIFRATRSIARGTVVLL
HGRNECIEKYFETVADLTAMGFWVATFDTRGQGGSERLLKKPGVGHVRRF
SDYQRDISLFLEQVVLPDTRLPFFMIAHSTGALAALAAAPGLSNRIDRLA
LCSPFIELDSQQSVPRSVIRLVATALSLVGLGRVQLGRDQRERDFDGNPL
TSDARRFARNLTLHRQFPELFIGAPTARWVYEALKTMGRVTRQDHLTNIT
VPTLILAPMLDTITPYKAQEELSRNFRAAQLLPITGARHELLHERDVFRK
QALAAIDAFFAPE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MIEATLRASEDNPVPGNQTVGYFTGHGGKQLRYAIFRATRSIARGTVVLL
HGRNECIEKYFETVADLTAMGFWVATFDTRGQGGSERLLKKPGVGHVRRF
SDYQRDISLFLEQVVLPDTRLPFFMIAHSTGALAALAAAPGLSNRIDRLA
LCSPFIELDSQQSVPRSVIRLVATALSLVGLGRVQLGRDQRERDFDGNPL
TSDARRFARNLTLHRQFPELFIGAPTARWVYEALKTMGRVTRQDHLTNIT
VPTLILAPMLDTITPYKAQEELSRNFRAAQLLPITGARHELLHERDVFRK
QALAAIDAFFAPE


References
    Title: Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
    Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A and Schluter A <3 more author(s)>
    Ref: J Biotechnol, 155:50, 2011 : PubMed

            

    Title: Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58
    Goodner B, Hinkle G, Gattung S, Miller N, Blanchard M, Qurollo B, Goldman BS, Cao Y, Askenazi M and Slater S <21 more author(s)>
    Ref: Science, 294:2323, 2001 : PubMed

            

    Title: The genome of the natural genetic engineer Agrobacterium tumefaciens C58
    Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE and Nester EW <41 more author(s)>
    Ref: Science, 294:2317, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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