Gene_Locus Report

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Gene_locus Report for: agrtu-ATU2452

Agrobacterium tumefaciens (strain C58 / ATCC 33970) hypothetical protein atu2452

Comment
previously 5_AlphaBeta_hydrolase


Relationship
Family|LYsophospholipase_carboxylesterase
Block| X
Position in NCBI Life Tree|Agrobacterium tumefaciens
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Rhizobiaceae: N E > Rhizobium/Agrobacterium group: N E > Agrobacterium: N E > Agrobacterium tumefaciens complex: N E > Agrobacterium tumefaciens: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
1 structure:
2R8B: The crystal structure of the protein Atu2452 of unknown function from Agrobacterium tumefaciens str. C58.
No kinetic





No Substrate
No inhibitor
2 Genbank : AE009192, AE008158
1 UniProt : A9CHT9
1 Structure : 2R8B
1 UniProt : A9CHT9
1 Interpro : A9CHT9
1 Prodom : A9CHT9
1 Pfam : A9CHT9
1 PIRSF : A9CHT9
1 SUPERFAM : A9CHT9
Sequence
Graphical view for this peptide sequence: agrtu-ATU2452
Colored MSA for LYsophospholipase_carboxylesterase (raw)
MPRPSLRRGEETSGARSLHEIAPPAEKAVRKPLNLLPFRKDTPMTKDSYF
HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHG
AARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGA
NILANVLIEQPELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPIC
PVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAYGG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPRPSLRRGEETSGARSLHEIAPPAEKAVRKPLNLLPFRKDTPMTKDSYF
HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHG
AARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGA
NILANVLIEQPELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPIC
PVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAYGG


References
    Title: Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58
    Goodner B, Hinkle G, Gattung S, Miller N, Blanchard M, Qurollo B, Goldman BS, Cao Y, Askenazi M and Slater S <21 more author(s)>
    Ref: Science, 294:2323, 2001 : PubMed

            

    Title: The genome of the natural genetic engineer Agrobacterium tumefaciens C58
    Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE and Nester EW <41 more author(s)>
    Ref: Science, 294:2317, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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