Gene_Locus Report

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Gene_locus Report for: ailme-d2i2g8

Ailuropoda melanoleuca (Giant panda) Putative uncharacterized protein

Relationship
Family|DPP4N_Peptidase_S9
Block| X
Position in NCBI Life Tree|Ailuropoda melanoleuca
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Laurasiatheria: N E > Carnivora: N E > Caniformia: N E > Ursidae: N E > Ailuropoda: N E > Ailuropoda melanoleuca: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : GL194164
1 UniProt : D2I2G8
1 UniProt : D2I2G8
1 Interpro : D2I2G8
1 Pfam : D2I2G8
1 PIRSF : D2I2G8
1 SUPERFAM : D2I2G8
Sequence
Graphical view for this peptide sequence: ailme-d2i2g8
Colored MSA for DPP4N_Peptidase_S9 (raw)
SFSLNSEGTERMATGVPVSDRGDAVEMEDPASRFQVQKHSWDGLRNIIHG
SRKNSGLIVNKAPHDFQFVQKADESSPHSHRLYYLGMPYGSRENSLLYSE
IPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGIT
SYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCTGPRMD
PKICPADPTFFSFINSNDLWVANIETGEERRLTFCHRGSPSVLDDPRSAG
VATFVIQEEFDRFTGYWWCPAASWEGSEGCKTLRILYEEVDESEVEIIHV
PSPALEERKTDSYRYPRTGSKNPKIALKLAEFQTDSQGKIVVTQEKELVQ
PFSALFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPTT
ENEEERMAFARAVPGNVQPHVVYEEVTDVWINVHDIFYPFPQSEGEDELC
FIRANECKTGFCHLYKVTAILKPSGYDWSEPLSPGEDEFKCPIKEEIALT
SGEWEVLARHGSKIWVNEATKLVYFQGTKDTPLEHHLYVVSYESAGEIVR
LTTPGFSHSCSMSQNFDMFISHYSSVGTPPCVHVYKLSGPDDDPLHKQPH
FWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKKHPTV
LFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFE
GALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGL
IHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGYEAGSVALHV
EKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERH
SIRCPESGEHYEVTLLHFLQEYL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

SFSLNSEGTERMATGVPVSDRGDAVEMEDPASRFQVQKHSWDGLRNIIHG
SRKNSGLIVNKAPHDFQFVQKADESSPHSHRLYYLGMPYGSRENSLLYSE
IPRKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGIT
SYDFHSESGLFLFQASNSLFHCRDGGKNGFMVSPMKPLEIKTQCTGPRMD
PKICPADPTFFSFINSNDLWVANIETGEERRLTFCHRGSPSVLDDPRSAG
VATFVIQEEFDRFTGYWWCPAASWEGSEGCKTLRILYEEVDESEVEIIHV
PSPALEERKTDSYRYPRTGSKNPKIALKLAEFQTDSQGKIVVTQEKELVQ
PFSALFPKVEYIARAGWTRDGKYAWAMFLDRPQQRLQLVLLPPALFIPTT
ENEEERMAFARAVPGNVQPHVVYEEVTDVWINVHDIFYPFPQSEGEDELC
FIRANECKTGFCHLYKVTAILKPSGYDWSEPLSPGEDEFKCPIKEEIALT
SGEWEVLARHGSKIWVNEATKLVYFQGTKDTPLEHHLYVVSYESAGEIVR
LTTPGFSHSCSMSQNFDMFISHYSSVGTPPCVHVYKLSGPDDDPLHKQPH
FWASMMEAASCPPDYVPPEIFHFHTRSDVRLYGMIYKPHAVQPGKKHPTV
LFVYGGPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFE
GALKNQMGQVEIEDQVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGL
IHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQLGYEAGSVALHV
EKLPNEPNRLLILHGFLDENVHFFHTNFLVSQLIRAGKPYQLQIYPNERH
SIRCPESGEHYEVTLLHFLQEYL


Reference
    Title: The sequence and de novo assembly of the giant panda genome
    Li R, Fan W, Tian G, Zhu H, He L, Cai J, Huang Q, Cai Q, Li B and Yang H <103 more author(s)>
    Ref: Nature, 463:311, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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