Gene_Locus Report

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Gene_locus Report for: anapl-b6dzk9

Anas platyrhynchos (Mallard) (Anas boschas); Cairina moschata (Muscovy duck). Lipoprotein lipase

Comment
Other strains: Anas platyrhynchos (Mallard) (Anas boschas); Cairina moschata (Muscovy duck)


Relationship
Family|Lipoprotein_Lipase
Block| L
Position in NCBI Life Tree|Anas platyrhynchos
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Sauropsida: N E > Sauria: N E > Archelosauria: N E > Archosauria: N E > Dinosauria: N E > Saurischia: N E > Theropoda: N E > Coelurosauria: N E > Aves: N E > Neognathae: N E > Galloanserae: N E > Anseriformes: N E > Anatidae: N E > Anas: N E > Anas platyrhynchos: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: anapl-b6dzk9
Colored MSA for Lipoprotein_Lipase (raw)
MERGREMGRKALLAALCLCLPWATAVGDEHAEAETNFEGIESKFSLRTPA
EPDEDVCYLVPGQMDSLAQCNFNHTSKTFVVIHGWTVTGMYESWVPKLVD
ALYKREPDSNVIVVDWLVRAQQHYPVSAAYTKLVGKDVAMFIDWMEEKVN
YPLNNVHLLGYSLGAHAAGIAGSLTKKKVNRITGLDPAGPTFEYADALTR
LSPDDADFVDVLHTYTRGSPDRSIGIQKPVGHIDIYPNGGGFQPGCNLGE
ALRLIAEKGLADVDQLVKCSHERSIHLFIDSLLYEEKPSMAYRCNTKEAF
EKGLCLSCRKNRCNNLGYKVNRVRTKRNTKMYLKTRAQMPYKVFHYQVKI
HFFGKTNMTKTNQPFLISLYGTLDESENIAFTLPEVSSNKTFSFLIYTEV
DIGDLLMLKLQWEKDSFFSWSDWWTPFTFSIQRVRVKSGETQKKVVFCSR
DGTSRLGKGEEAAIFVKCLEQPVNRKRGGAKKASKENSAHESA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MERGREMGRKALLAALCLCLPWATAVGDEHAEAETNFEGIESKFSLRTPA
EPDEDVCYLVPGQMDSLAQCNFNHTSKTFVVIHGWTVTGMYESWVPKLVD
ALYKREPDSNVIVVDWLVRAQQHYPVSAAYTKLVGKDVAMFIDWMEEKVN
YPLNNVHLLGYSLGAHAAGIAGSLTKKKVNRITGLDPAGPTFEYADALTR
LSPDDADFVDVLHTYTRGSPDRSIGIQKPVGHIDIYPNGGGFQPGCNLGE
ALRLIAEKGLADVDQLVKCSHERSIHLFIDSLLYEEKPSMAYRCNTKEAF
EKGLCLSCRKNRCNNLGYKVNRVRTKRNTKMYLKTRAQMPYKVFHYQVKI
HFFGKTNMTKTNQPFLISLYGTLDESENIAFTLPEVSSNKTFSFLIYTEV
DIGDLLMLKLQWEKDSFFSWSDWWTPFTFSIQRVRVKSGETQKKVVFCSR
DGTSRLGKGEEAAIFVKCLEQPVNRKRGGAKKASKENSAHESA


Reference
    Title: The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
    Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y and Li N <40 more author(s)>
    Ref: Nat Genet, 45:776, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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