Gene_Locus Report

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Gene_locus Report for: anapl-r0jhf3

Anas platyrhynchos (Mallard) (Anas boschas); Anas platyrhynchos platyrhynchos (Northern mallard). Lipase member H

Comment
Other strains: Anas platyrhynchos (Mallard) (Anas boschas); Anas platyrhynchos platyrhynchos (Northern mallard)


Relationship
Family|Phospholipase
Block| L
Position in NCBI Life Tree|Anas platyrhynchos
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Sauropsida: N E > Sauria: N E > Archelosauria: N E > Archosauria: N E > Dinosauria: N E > Saurischia: N E > Theropoda: N E > Coelurosauria: N E > Aves: N E > Neognathae: N E > Galloanserae: N E > Anseriformes: N E > Anatidae: N E > Anas: N E > Anas platyrhynchos: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : KB743899
3 UniProt : R0JHF3, A0A493U378, U3IRS6
3 UniProt : R0JHF3, A0A493U378, U3IRS6
3 Interpro : R0JHF3, A0A493U378, U3IRS6
3 Pfam : R0JHF3, A0A493U378, U3IRS6
3 PIRSF : R0JHF3, A0A493U378, U3IRS6
3 SUPERFAM : R0JHF3, A0A493U378, U3IRS6
Sequence
Graphical view for this peptide sequence: anapl-r0jhf3
Colored MSA for Phospholipase (raw)
MLKLCFFICLVYGVKSDEEKKCPEFTDLNIGNALSGTELEVQLLLYTREN
PNCSEKLNEHNVTASEYLNTSKKTVFVIHGFRPTGSPPAWLGDIKELLLS
SGDINLIIVDWNRGATTVIYTTAVENCRKVADRLKNYVDQMLADGASLDS
MHMIGVSLGAHIAGFVGHKYDGKLGRITGLDPAGPSFTGEPPEGRLDRTD
AKFVDVIHTDTDVLGFKKPLGTIDFYPNGGMDQPGCPQTVFSGLQYFKCD
HQRSVFLFLSSLKRKCNIIAYPCDSYSDYKRGKCVDCEAFQPMSCPVMGY
YADGWKKHLIMKTSPTKAYFDTSDNDPFCMYNYLLYITTWNKSIRRGFIK
VKITDYAGNTIESEVNSEVATFQQYKRVKILTGFYRDFDKISKISLTFST
KTLIGPKYKLRILQMRLKSLNNPERVQLCRYDFVLMENTELTFKPIPCPE
NST
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLKLCFFICLVYGVKSDEEKKCPEFTDLNIGNALSGTELEVQLLLYTREN
PNCSEKLNEHNVTASEYLNTSKKTVFVIHGFRPTGSPPAWLGDIKELLLS
SGDINLIIVDWNRGATTVIYTTAVENCRKVADRLKNYVDQMLADGASLDS
MHMIGVSLGAHIAGFVGHKYDGKLGRITGLDPAGPSFTGEPPEGRLDRTD
AKFVDVIHTDTDVLGFKKPLGTIDFYPNGGMDQPGCPQTVFSGLQYFKCD
HQRSVFLFLSSLKRKCNIIAYPCDSYSDYKRGKCVDCEAFQPMSCPVMGY
YADGWKKHLIMKTSPTKAYFDTSDNDPFCMYNYLLYITTWNKSIRRGFIK
VKITDYAGNTIESEVNSEVATFQQYKRVKILTGFYRDFDKISKISLTFST
KTLIGPKYKLRILQMRLKSLNNPERVQLCRYDFVLMENTELTFKPIPCPE
NST


Reference
    Title: The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
    Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y and Li N <40 more author(s)>
    Ref: Nat Genet, 45:776, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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