Gene_Locus Report

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Gene_locus Report for: anapl-r0l4n7

Anas platyrhynchos (Domestic duck) (Anas boschas) Uncharacterized protein KIAA1310

Relationship
Family|NLS3-Tex30
Block| X
Position in NCBI Life Tree|Anas platyrhynchos
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Sauropsida: N E > Sauria: N E > Archelosauria: N E > Archosauria: N E > Dinosauria: N E > Saurischia: N E > Theropoda: N E > Coelurosauria: N E > Aves: N E > Neognathae: N E > Galloanserae: N E > Anseriformes: N E > Anatidae: N E > Anas: N E > Anas platyrhynchos: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : KB743182, ADON01040102, ADON01079858
3 UniProt : R0L4N7, U3IA27, U3I725
3 UniProt : R0L4N7, U3IA27, U3I725
3 Interpro : R0L4N7, U3IA27, U3I725
3 Pfam : R0L4N7, U3IA27, U3I725
3 PIRSF : R0L4N7, U3IA27, U3I725
3 SUPERFAM : R0L4N7, U3IA27, U3I725
Sequence
Graphical view for this peptide sequence: anapl-r0l4n7
Colored MSA for NLS3-Tex30 (raw)
NKPSKLPGSPLILIASSGPSNSMFPTSRRHRFWQSQLSCLGKVIPIATHL
HNGSGVGVLQCLEHMIGAVRSKVAEIHNHFSHKPIILIGWNTGALVACHV
SVMEYVTAVVCLGFPLLTVDGPRGDIDDPLLEMKTPVLFVIGQNSLQCNI
EAMEDFREKIRADNSMVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQDE
IADFLTGVLTRA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

NKPSKLPGSPLILIASSGPSNSMFPTSRRHRFWQSQLSCLGKVIPIATHL
HNGSGVGVLQCLEHMIGAVRSKVAEIHNHFSHKPIILIGWNTGALVACHV
SVMEYVTAVVCLGFPLLTVDGPRGDIDDPLLEMKTPVLFVIGQNSLQCNI
EAMEDFREKIRADNSMVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQDE
IADFLTGVLTRA


Reference
    Title: The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
    Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y and Li N <40 more author(s)>
    Ref: Nat Genet, 45:776, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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