Gene_Locus Report

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Gene_locus Report for: anoda-e3x331

Anopheles darlingi (Mosquito) Putative uncharacterized protein

Relationship
Family|DPP4N_Peptidase_S9
Block| X
Position in NCBI Life Tree|Anopheles darlingi
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Nematocera: N E > Culicomorpha: N E > Culicoidea: N E > Culicidae: N E > Anophelinae: N E > Anopheles [genus]: N E > Nyssorhynchus: N E > argyritarsis section: N E > argyritarsis series: N E > darlingi group: N E > Anopheles darlingi: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ADMH01002672
Sequence
Graphical view for this peptide sequence: anoda-e3x331
Colored MSA for DPP4N_Peptidase_S9 (raw)
MAASSGNSIEIGHSDQELVGSGKSSLRRYMLLGTLALILTVIAVGLVVML
TAANDEGSSSPETSPIVATGDPITLEDILMGRLSANGFTGTWTSNGKIIY
RDDLGSVMLYDPEQNDAKTLLGPAHEQLLQGFKFDLSPDGNYLLVARGYS
KIFRHSFLAIYDIVELSTRRIIPVNVGGARRPLNLVEWGPTDHSFVFVFE
NNLYYRQSPEATEIQITTDGSPSVYNGIPDWVYEEEVFSTNIATWFSPDG
RQIAFIRFNDTETPLMKIPIYGPPGNPDYQYPHELSLHYPKVGTKNPIVH
LFQYDLQERKMQEVEPPRELVNANHDHIITSVGWSSSSERLVTIWKNRVQ
NHAILRSCKPMNGSAAPANDCETVHEIKLTDGWLDLFSAPMFNAAGTHFL
VVASQSQGTAGGFKHITMISTTEPSSAVALTKGQFVVQDLLKWDAETNMI
FYTANTEEESHVLHVYAIEGRVGAAAPQCLTCDVSVGEKQSFFNAQISPK
VGNYLVLEARGPNIPWSHVFHWSVTEAKKVELKLIKAWESNSFLETMLKR
KAVPKVEIHELELDNGFKAKALLLIPPGINTTSSALQYPMLVDVYGGPNS
ANVVGTWSIGWGTHLASNRSVVYAKIDGRGSGLRGDRLLYQIYRKLGTVE
IEDQIAGARKLAEKLPYIDSKRVAIWGWSYGGYASAMALAQDTEHVFQCA
ASVAPVTDWSFYDSIYTERYMGLPKDDNQRGYEQSRLTAQYDRFRNRNYL
LIHGTFDDNVHFQQAMQLSRALETHDIMFKQVSA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAASSGNSIEIGHSDQELVGSGKSSLRRYMLLGTLALILTVIAVGLVVML
TAANDEGSSSPETSPIVATGDPITLEDILMGRLSANGFTGTWTSNGKIIY
RDDLGSVMLYDPEQNDAKTLLGPAHEQLLQGFKFDLSPDGNYLLVARGYS
KIFRHSFLAIYDIVELSTRRIIPVNVGGARRPLNLVEWGPTDHSFVFVFE
NNLYYRQSPEATEIQITTDGSPSVYNGIPDWVYEEEVFSTNIATWFSPDG
RQIAFIRFNDTETPLMKIPIYGPPGNPDYQYPHELSLHYPKVGTKNPIVH
LFQYDLQERKMQEVEPPRELVNANHDHIITSVGWSSSSERLVTIWKNRVQ
NHAILRSCKPMNGSAAPANDCETVHEIKLTDGWLDLFSAPMFNAAGTHFL
VVASQSQGTAGGFKHITMISTTEPSSAVALTKGQFVVQDLLKWDAETNMI
FYTANTEEESHVLHVYAIEGRVGAAAPQCLTCDVSVGEKQSFFNAQISPK
VGNYLVLEARGPNIPWSHVFHWSVTEAKKVELKLIKAWESNSFLETMLKR
KAVPKVEIHELELDNGFKAKALLLIPPGINTTSSALQYPMLVDVYGGPNS
ANVVGTWSIGWGTHLASNRSVVYAKIDGRGSGLRGDRLLYQIYRKLGTVE
IEDQIAGARKLAEKLPYIDSKRVAIWGWSYGGYASAMALAQDTEHVFQCA
ASVAPVTDWSFYDSIYTERYMGLPKDDNQRGYEQSRLTAQYDRFRNRNYL
LIHGTFDDNVHFQQAMQLSRALETHDIMFKQVSA


Reference
    Title: Combination of measures distinguishes pre-miRNAs from other stem-loops in the genome of the newly sequenced Anopheles darlingi
    Mendes ND, Freitas AT, Vasconcelos AT, Sagot MF
    Ref: BMC Genomics, 11:529, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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