Gene_Locus Report

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Gene_locus Report for: anoda-w5jul4

Anopheles darlingi (Mosquito). Uncharacterized protein

Relationship
Family|Carb_B_Arthropoda
Block| C
Position in NCBI Life Tree|Anopheles darlingi
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Nematocera: N E > Culicomorpha: N E > Culicoidea: N E > Culicidae: N E > Anophelinae: N E > Anopheles [genus]: N E > Nyssorhynchus: N E > argyritarsis section: N E > argyritarsis series: N E > darlingi group: N E > Anopheles darlingi: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ADMH02000448
1 UniProt : W5JUL4
1 UniProt : W5JUL4
1 Interpro : W5JUL4
1 Pfam : W5JUL4
1 PIRSF : W5JUL4
1 SUPERFAM : W5JUL4
Sequence
Graphical view for this peptide sequence: anoda-w5jul4
Colored MSA for Carb_B_Arthropoda (raw)
MEVARLVNKWIPYQQASLKIDCIEESCCYEGYVLYFQDRPIVSTTAGQVQ
GTTEQCGLFCTYYSFKGIPYAEPPLGALRFSDTVPKAAWSGVRDASNHGA
TCPSQDMAPTESEDCLFLNVYTPSLIGTRSIMVFIPGGGFSAGSGDDALY
GGQYFMGEDVVLVTLNYRLGALGFLSTGDRAAAGNWALKDCIEALRWVQR
NALAFGGDPSSVTIFGQSAGGVLVHILTLSPLSNGLFQKAIAHSGLAFNS
WAFQPNPRFYANRLAQALGVPSGDTVAMVTALRSIPYRQIVALQDNILTR
TADALLTPIDFGPVVEPSDTPGAVVLPQQPIDIIDAGTFQPIPLMAGFTD
MDALIFTVFWSLTNPALFQTFNNDPHLLVPLVWNIPRGSAGSSAVSEGFA
QYYWQGQPLGFERLEQFTHYITDQLYNYGILEGARRHSLRSPAYVYQFSY
VGDLNIYRQSMGPIGIPGAVHSDDLCYLFEPKAFLVGQLPPISHAITVRN
RMLRMWTNFAKYGNPTPTADPLLQNINWPPIASGTVNVGLNIAQNLVPGP
NPVATRYNLWQDLAQRYGNNIFRN
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEVARLVNKWIPYQQASLKIDCIEESCCYEGYVLYFQDRPIVSTTAGQVQ
GTTEQCGLFCTYYSFKGIPYAEPPLGALRFSDTVPKAAWSGVRDASNHGA
TCPSQDMAPTESEDCLFLNVYTPSLIGTRSIMVFIPGGGFSAGSGDDALY
GGQYFMGEDVVLVTLNYRLGALGFLSTGDRAAAGNWALKDCIEALRWVQR
NALAFGGDPSSVTIFGQSAGGVLVHILTLSPLSNGLFQKAIAHSGLAFNS
WAFQPNPRFYANRLAQALGVPSGDTVAMVTALRSIPYRQIVALQDNILTR
TADALLTPIDFGPVVEPSDTPGAVVLPQQPIDIIDAGTFQPIPLMAGFTD
MDALIFTVFWSLTNPALFQTFNNDPHLLVPLVWNIPRGSAGSSAVSEGFA
QYYWQGQPLGFERLEQFTHYITDQLYNYGILEGARRHSLRSPAYVYQFSY
VGDLNIYRQSMGPIGIPGAVHSDDLCYLFEPKAFLVGQLPPISHAITVRN
RMLRMWTNFAKYGNPTPTADPLLQNINWPPIASGTVNVGLNIAQNLVPGP
NPVATRYNLWQDLAQRYGNNIFRN


References
    Title: The genome of Anopheles darlingi, the main neotropical malaria vector
    Marinotti O, Cerqueira GC, de Almeida LG, Ferro MI, Loreto EL, Zaha A, Teixeira SM, Wespiser AR, Almeida ESA and de Vasconcelos AT <59 more author(s)>
    Ref: Nucleic Acids Research, 41:7387, 2013 : PubMed

            

    Title: Combination of measures distinguishes pre-miRNAs from other stem-loops in the genome of the newly sequenced Anopheles darlingi
    Mendes ND, Freitas AT, Vasconcelos AT, Sagot MF
    Ref: BMC Genomics, 11:529, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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