Gene_Locus Report

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Gene_locus Report for: apime-a0a088atg1

Apis mellifera (Honeybee). Uncharacterized protein

Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Apis mellifera
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Hymenoptera: N E > Apocrita: N E > Aculeata: N E > Apoidea: N E > Apidae: N E > Apinae: N E > Apini: N E > Apis: N E > Apis mellifera: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : FJ580052
1 UniProt : B9VMQ8
1 UniProt : B9VMQ8
1 Interpro : B9VMQ8
1 Pfam : B9VMQ8
1 PIRSF : B9VMQ8
1 SUPERFAM : B9VMQ8
Sequence
Graphical view for this peptide sequence: apime-a0a088atg1
Colored MSA for Neuroligin (raw)
MPPVTPTPWRGTKLADTVPPACPQRPPEPDSSLPRSKRAYLERLAPMLAN
QSEDCLYLNLYVPKTPHGSTPDLLPTLLLIHGDSYSWGAGNSFDGTALAA
YGRLIVVSINFRLGVLGFLKTGPKGSAQGNYGLMDLVAGLHWLHENLGAF
GGDPDRLTLFGYGTGAALANFLAVSPMVKELVERVVLLGGSALSPWAIQR
DPLTVKHHVAQQTGCPGNVEADDIAPCLRLRSLEDLLSVHLDPPRFTSGF
APFVDGAVMPPPINQNFQPTASSSGLMPLVPGPGTEFANFGDRDLMLGLT
SEEAWVNLTDEDLQNGLNETRRDRILRTYVRNTYRYHLHEIYSTLRNEYT
DWERGEQSPLAICDGLLSLLGDGQVAAPLLRLALLHSASGGRGYFLHFQL
GERPSQRGEEVPYLLGIPLLRGEIASILIGQANYTSADENLSKLLVHYLA
NFVRRGDPNGASPLTSGSDGLPTSPPFWDSYDSINQLYLEAGRSTEMRSH
YRGHKMSLWLNLLPQLHRPGYEISMRHHHLAETATLYEGVVRSQTLAQPL
PPPPLPVPSPTEPSSILSSVVSTTECTPNATVATTVPTTTHAPNAHPNLG
PGPNNILKKLASNHYQNYTTALSVTIGVGVFLLVLNIMIFAGIYYQRDRN
SSRSSASAFANKKKEELLEAGCSGIEAPSAKQRLSTLNLMDSPSSSPPPH
KAKLAQELELQLQEFQCSPPPGGGKRGVLEPPLYTRSPCVQRTRTPSPCV
DATTARMDDDEDEDDDDEDEDDDDDDDEDEDENGGNSSDDNDDENLPEPP
PPPKVPAPNVNLSCPGILRQPGTPGSAKKRVQIQEISV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPPVTPTPWRGTKLADTVPPACPQRPPEPDSSLPRSKRAYLERLAPMLAN
QSEDCLYLNLYVPKTPHGSTPDLLPTLLLIHGDSYSWGAGNSFDGTALAA
YGRLIVVSINFRLGVLGFLKTGPKGSAQGNYGLMDLVAGLHWLHENLGAF
GGDPDRLTLFGYGTGAALANFLAVSPMVKELVERVVLLGGSALSPWAIQR
DPLTVKHHVAQQTGCPGNVEADDIAPCLRLRSLEDLLSVHLDPPRFTSGF
APFVDGAVMPPPINQNFQPTASSSGLMPLVPGPGTEFANFGDRDLMLGLT
SEEAWVNLTDEDLQNGLNETRRDRILRTYVRNTYRYHLHEIYSTLRNEYT
DWERGEQSPLAICDGLLSLLGDGQVAAPLLRLALLHSASGGRGYFLHFQL
GERPSQRGEEVPYLLGIPLLRGEIASILIGQANYTSADENLSKLLVHYLA
NFVRRGDPNGASPLTSGSDGLPTSPPFWDSYDSINQLYLEAGRSTEMRSH
YRGHKMSLWLNLLPQLHRPGYEISMRHHHLAETATLYEGVVRSQTLAQPL
PPPPLPVPSPTEPSSILSSVVSTTECTPNATVATTVPTTTHAPNAHPNLG
PGPNNILKKLASNHYQNYTTALSVTIGVGVFLLVLNIMIFAGIYYQRDRN
SSRSSASAFANKKKEELLEAGCSGIEAPSAKQRLSTLNLMDSPSSSPPPH
KAKLAQELELQLQEFQCSPPPGGGKRGVLEPPLYTRSPCVQRTRTPSPCV
DATTARMDDDEDEDDDDEDEDDDDDDDEDEDENGGNSSDDNDDENLPEPP
PPPKVPAPNVNLSCPGILRQPGTPGSAKKRVQIQEISV


References
    Title: Bridging the synaptic gap: neuroligins and neurexin I in Apis mellifera
    Biswas S, Russell RJ, Jackson CJ, Vidovic M, Ganeshina O, Oakeshott JG, Claudianos C
    Ref: PLoS ONE, 3:e3542, 2008 : PubMed

            

    Title: A deficit of detoxification enzymes: pesticide sensitivity and environmental response in the honeybee
    Claudianos C, Ranson H, Johnson RM, Biswas S, Schuler MA, Berenbaum MR, Feyereisen R, Oakeshott JG
    Ref: Insect Molecular Biology, 15:615, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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