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Gene_locus Report for: arath-AT5G62180

Arabidopsis thaliana carboxylesterase 20 AtCXE20 AT5G62180

Comment
Arabidopsis carboxylesterase 20 binds strigolactone and increases branches and tillers when ectopically expressed in Arabidopsis and Maize (Roesler et al.)


Relationship
Family|Plant_carboxylesterase
Block| H
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





1 substrate:
Paranitrophenylacetate
2 inhibitors: 5-Deoxystrigol, GR24
3 Genbank : BAA97182, AED97578, NP_201024
1 UniProt : Q9LVB8
1 Ncbi-nid : 3869074
1 Ncbi-pid : 8809631
1 UniProt : Q9LVB8
1 Interpro : Q9LVB8
1 Prodom : Q9LVB8
1 Pfam : Q9LVB8
1 PIRSF : Q9LVB8
1 SUPERFAM : Q9LVB8
1 Tair database : AT5G62180
Sequence
Graphical view for this peptide sequence: arath-AT5G62180
Colored MSA for Plant_carboxylesterase (raw)
MSEPSPIADPYAYLNIVNNPDGSITRDLSNFPCTAATPDPSPLNPAVSKD
LPVNQLKSTWLRLYLPSSAVNEGNVSSQKLPIVVYYHGGGFILCSVDMQL
FHDFCSEVARDLNAIVVSPSYRLAPEHRLPAAYDDGVEALDWIKTSDDEW
IKSHADFSNVFLMGTSAGGNLAYNVGLRSVDSVSDLSPLQIRGLILHHPF
FGGEERSESEIRLMNDQVCPPIVTDVMWDLSLPVGVDRDHEYSNPTVGDG
SEKLEKIGRLRWKVMMIGGEDDPMIDLQKDVAKLMKKKGVEVVEHYTGGH
VHGAEIRDPSKRKTLFLSIKNFIFSVL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSEPSPIADPYAYLNIVNNPDGSITRDLSNFPCTAATPDPSPLNPAVSKD
LPVNQLKSTWLRLYLPSSAVNEGNVSSQKLPIVVYYHGGGFILCSVDMQL
FHDFCSEVARDLNAIVVSPSYRLAPEHRLPAAYDDGVEALDWIKTSDDEW
IKSHADFSNVFLMGTSAGGNLAYNVGLRSVDSVSDLSPLQIRGLILHHPF
FGGEERSESEIRLMNDQVCPPIVTDVMWDLSLPVGVDRDHEYSNPTVGDG
SEKLEKIGRLRWKVMMIGGEDDPMIDLQKDVAKLMKKKGVEVVEHYTGGH
VHGAEIRDPSKRKTLFLSIKNFIFSVL


References
2 more
    Title: Arabidopsis Carboxylesterase 20 Binds Strigolactone and Increases Branches and Tillers When Ectopically Expressed in Arabidopsis and Maize
    Roesler K, Lu C, Thomas J, Xu Q, Vance P, Hou Z, Williams RW, Liu L, Owens MA, Habben JE
    Ref: Front Plant Sci, 12:639401, 2021 : PubMed

            

    Title: The carboxylesterase gene family from Arabidopsis thaliana
    Marshall SD, Putterill JJ, Plummer KM, Newcomb RD
    Ref: Journal of Molecular Evolution, 57:487, 2003 : PubMed

            

    Title: Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence features of the regions of 3,076,755 bp covered by sixty P1 and TAC clones
    Sato S, Nakamura Y, Kaneko T, Katoh T, Asamizu E, Kotani H, Tabata S
    Ref: DNA Research, 7:31, 2000 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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