Gene_Locus Report

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Gene_locus Report for: arath-Q84JS1

Arabidopsis thaliana (Mouse-ear cress) Pectinacetylesterase-like protein AtPAE6

Relationship
Family|Pectinacetylesterase-Notum
Block| X
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AL138651, BT003870, BT005088
1 UniProt : Q84JS1
1 UniProt : Q84JS1
1 Interpro : Q84JS1
1 Prodom : Q84JS1
1 Pfam : Q84JS1
1 PIRSF : Q84JS1
1 SUPERFAM : Q84JS1
1 Tair database : At3g62060
Sequence
Graphical view for this peptide sequence: arath-Q84JS1
Colored MSA for Pectinacetylesterase-Notum (raw)
MRSLLLWIAVVVCLLCSVAAVVQSGSSDGFGKPRDTETAISFLEYKLMAP
SVPMIPLTLIHGADSKGAVCLDGTLPGYHLDRGFGSGANSWLIQLEGGGW
CNNHRSCVYRKTSRRGSSKFMEKALAFTGILSNRSEENPDFFNWNRIKLR
YCDGASFSGDSQDESSQLFYRGQRIWQVAMEEFLSLGMKQANQALLSGCS
AGGLASILHCDEFRELLPSSTKVKCLSDAGMFLDSVDVSGGHSLRNMFQG
VVTVQNLQKDLSSTCTNHLDPTSCFFPQNLVSDIKTPMFLLNTAYDSWQI
QESLAPPTADPGGIWKACKSDHSRCNSSQIQFFQEFRNQMLFAVNSFSNS
DQNGLYINSCFAHCQTERQDTWFAQDSPQLNGKRVAESVGDWYFDRAKNV
KAIDCPYPCDTTCHNLIFE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRSLLLWIAVVVCLLCSVAAVVQSGSSDGFGKPRDTETAISFLEYKLMAP
SVPMIPLTLIHGADSKGAVCLDGTLPGYHLDRGFGSGANSWLIQLEGGGW
CNNHRSCVYRKTSRRGSSKFMEKALAFTGILSNRSEENPDFFNWNRIKLR
YCDGASFSGDSQDESSQLFYRGQRIWQVAMEEFLSLGMKQANQALLSGCS
AGGLASILHCDEFRELLPSSTKVKCLSDAGMFLDSVDVSGGHSLRNMFQG
VVTVQNLQKDLSSTCTNHLDPTSCFFPQNLVSDIKTPMFLLNTAYDSWQI
QESLAPPTADPGGIWKACKSDHSRCNSSQIQFFQEFRNQMLFAVNSFSNS
DQNGLYINSCFAHCQTERQDTWFAQDSPQLNGKRVAESVGDWYFDRAKNV
KAIDCPYPCDTTCHNLIFE


References
    Title: Plant pectin acetylesterase structure and function: new insights from bioinformatic analysis
    Philippe F, Pelloux J, Rayon C
    Ref: BMC Genomics, 18:456, 2017 : PubMed

            

    Title: Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana
    Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Blocker H, Perez-Alonso M and Tabata S <127 more author(s)>
    Ref: Nature, 408:820, 2000 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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