Gene_Locus Report

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Gene_locus Report for: arath-SCP36

Arabidopsis thaliana (Mouse-ear cress) F4F15.110 At3g52000 SCPL36 serine-type carboxypeptidase like protein

Relationship
Family|Carboxypeptidase_S10
Block| X
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AL049711
1 UniProt : Q9SV04
1 UniProt : Q9SV04
1 Interpro : Q9SV04
1 Prodom : Q9SV04
1 Pfam : Q9SV04
1 PIRSF : Q9SV04
1 SUPERFAM : Q9SV04
1 Tair database : At3g52000
Sequence
Graphical view for this peptide sequence: arath-SCP36
Colored MSA for Carboxypeptidase_S10 (raw)
MGKRQDWSVTACIFLFLSLASQIHCRSHIPFPSPKRGVSSSGDTSHFNVI
QRESVPSPKDKDLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVET
IKPGNTTPLVIWFNGGPGCSSLGGAFKELGPFRVHSDGKTLFRNPYSWNN
EANVLFLETPVGTGFSYSNSPINGKQGDKATAEDNYMFLVNWLERFPEYK
GRDIYIAGQSYAGHYVPQLAQIILHRNNQTLINLRGILIGNPSLNREIQD
DFGYKFMFSHGLISQQQMDNYNKFCTDSDLYDWDKCHLASQKIEAQKTHL
DIYNIYAPLCLNSTLSSEPKKCTTIMKADPCSGNYLKAYLNIKEVQEAIH
ANTTKIPYEWTSCNTKLLWEWNEKDRYVSLTPILQELMGKGVRVMLYNGD
VDLVIPFTSTLAVVKTMNLTVVKEWRPWFTGGHVGGFTEDYKGNLTFVTV
KGAGHSVPTDQPIHALNIFTSFIRNTPLPQTA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MGKRQDWSVTACIFLFLSLASQIHCRSHIPFPSPKRGVSSSGDTSHFNVI
QRESVPSPKDKDLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVET
IKPGNTTPLVIWFNGGPGCSSLGGAFKELGPFRVHSDGKTLFRNPYSWNN
EANVLFLETPVGTGFSYSNSPINGKQGDKATAEDNYMFLVNWLERFPEYK
GRDIYIAGQSYAGHYVPQLAQIILHRNNQTLINLRGILIGNPSLNREIQD
DFGYKFMFSHGLISQQQMDNYNKFCTDSDLYDWDKCHLASQKIEAQKTHL
DIYNIYAPLCLNSTLSSEPKKCTTIMKADPCSGNYLKAYLNIKEVQEAIH
ANTTKIPYEWTSCNTKLLWEWNEKDRYVSLTPILQELMGKGVRVMLYNGD
VDLVIPFTSTLAVVKTMNLTVVKEWRPWFTGGHVGGFTEDYKGNLTFVTV
KGAGHSVPTDQPIHALNIFTSFIRNTPLPQTA


References
    Title: An expression and bioinformatics analysis of the Arabidopsis serine carboxypeptidase-like gene family
    Fraser CM, Rider LW, Chapple C
    Ref: Plant Physiol, 138:1136, 2005 : PubMed

            

    Title: Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana
    Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Blocker H, Perez-Alonso M and Tabata S <127 more author(s)>
    Ref: Nature, 408:820, 2000 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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