Gene_Locus Report

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Gene_locus Report for: artma-b5w5h8

Arthrospira maxima, Arthrospira sp.; Arthrospira platensis, Uncharacterized protein

Comment
Other strains: Arthrospira maxima CS-328; Arthrospira sp. PCC 8005; Arthrospira platensis C1


Relationship
Family|Lipase_2
Block| X
Position in NCBI Life Tree|Arthrospira maxima CS-328
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Oscillatoriophycideae: N E > Oscillatoriales: N E > Microcoleaceae: N E > Arthrospira: N E > Arthrospira maxima: N E > Arthrospira maxima CS-328: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 1 more: ABYK01000035, FO818640, CAFN01000667
3 UniProt : B5W5H8, H1WKL5, K1WBW4
3 UniProt : B5W5H8, H1WKL5, K1WBW4
3 Interpro : B5W5H8, H1WKL5, K1WBW4
3 Pfam : B5W5H8, H1WKL5, K1WBW4
3 PIRSF : B5W5H8, H1WKL5, K1WBW4
3 SUPERFAM : B5W5H8, H1WKL5, K1WBW4
Sequence
Graphical view for this peptide sequence: artma-b5w5h8
Colored MSA for Lipase_2 (raw)
MKNNQALNPVLLIHGIFDTIAIFQVMSRHLRQKGWEVHSFNLCPNYGLSG
IECLAEQIVEYADQNFAPNQPFDLVGFSMGGIVSRYYVQKLGGIERVQRL
ITISSPHNGTMTANLYPTQAAAQMRANSPLLLDLNNNIGMLDRLNFTSIW
TRFDLMIVPANSSHLNLGEEIILDVPLHAWMVKDPNCIAAVEKALRTALK
FQQGKVI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKNNQALNPVLLIHGIFDTIAIFQVMSRHLRQKGWEVHSFNLCPNYGLSG
IECLAEQIVEYADQNFAPNQPFDLVGFSMGGIVSRYYVQKLGGIERVQRL
ITISSPHNGTMTANLYPTQAAAQMRANSPLLLDLNNNIGMLDRLNFTSIW
TRFDLMIVPANSSHLNLGEEIILDVPLHAWMVKDPNCIAAVEKALRTALK
FQQGKVI


References
    Title: Draft genome sequence of Arthrospira platensis C1 (PCC9438)
    Cheevadhanarak S, Paithoonrangsarid K, Prommeenate P, Kaewngam W, Musigkain A, Tragoonrung S, Tabata S, Kaneko T, Chaijaruwanich J and Tanticharoen M <18 more author(s)>
    Ref: Stand Genomic Sci, 6:43, 2012 : PubMed

            

    Title: Contribution of a sodium ion gradient to energy conservation during fermentation in the cyanobacterium Arthrospira (Spirulina) maxima CS-328
    Carrieri D, Ananyev G, Lenz O, Bryant DA, Dismukes GC
    Ref: Applied Environmental Microbiology, 77:7185, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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