Gene_Locus Report

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Gene_locus Report for: bacam-q1rs69

Bacillus amyloliquefaciens (Bacillus velezensis) baeR polyketide synthase

Comment
Other strains: Bacillus amyloliquefaciens (strain FZB42) only c-term PfamA Thioesterase 2179 2454


Relationship
Family|Thioesterase
Block| X
Position in NCBI Life Tree|Bacillus amyloliquefaciens
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Bacillaceae: N E > Bacillus: N E > Bacillus subtilis group: N E > Bacillus amyloliquefaciens group: N E > Bacillus amyloliquefaciens: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AJ634060
2 UniProt : Q1RS69, A7Z4Y9
2 UniProt : Q1RS69, A7Z4Y9
2 Interpro : Q1RS69, A7Z4Y9
2 Prodom : Q1RS69, A7Z4Y9
2 Pfam : Q1RS69, A7Z4Y9
2 PIRSF : Q1RS69, A7Z4Y9
2 SUPERFAM : Q1RS69, A7Z4Y9
Sequence
Graphical view for this peptide sequence: bacam-q1rs69
Colored MSA for Thioesterase (raw)
MKAAEIDQNKPLTEYGFDSISSIQLLKKLEDGDSRISLEALQKCSTLQEI
GMLLKTNQPQETGRNFPELVKLNEREKGRPVFWFHGGTGGVEAYQPFAKK
SQRPFYGIQARGLTGKEPLQGIEETAASYKRIIQAVQPKGPYDLGGYSLG
GMLAYETARLLQEEGHTVKSAVMIDTPYSEKWKERKPSVKSVMLQTINTM
LTAYLKPENLEEALISREDITVQAEEEEVLKELIGLAKKRGLPKSEEAIR
MQLEQMMKTQLAYGMEEYDMKPLPHPEALQCYYFRNKSGLFLGDLERYLT
AEEEQIPLDHDAYWKEWEHQMKQFHLLDVHSSNHVTMLSEPKPQNAIKAF
CEKLYANKGTISANFLKSFRKKLDETNELVKR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKAAEIDQNKPLTEYGFDSISSIQLLKKLEDGDSRISLEALQKCSTLQEI
GMLLKTNQPQETGRNFPELVKLNEREKGRPVFWFHGGTGGVEAYQPFAKK
SQRPFYGIQARGLTGKEPLQGIEETAASYKRIIQAVQPKGPYDLGGYSLG
GMLAYETARLLQEEGHTVKSAVMIDTPYSEKWKERKPSVKSVMLQTINTM
LTAYLKPENLEEALISREDITVQAEEEEVLKELIGLAKKRGLPKSEEAIR
MQLEQMMKTQLAYGMEEYDMKPLPHPEALQCYYFRNKSGLFLGDLERYLT
AEEEQIPLDHDAYWKEWEHQMKQFHLLDVHSSNHVTMLSEPKPQNAIKAF
CEKLYANKGTISANFLKSFRKKLDETNELVKR


References
    Title: Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42
    Chen XH, Koumoutsi A, Scholz R, Eisenreich A, Schneider K, Heinemeyer I, Morgenstern B, Voss B, Hess WR and Borriss R <9 more author(s)>
    Ref: Nat Biotechnol, 25:1007, 2007 : PubMed

            

    Title: Structural and functional characterization of three polyketide synthase gene clusters in Bacillus amyloliquefaciens FZB 42
    Chen XH, Vater J, Piel J, Franke P, Scholz R, Schneider K, Koumoutsi A, Hitzeroth G, Grammel N and Borriss R <3 more author(s)>
    Ref: Journal of Bacteriology, 188:4024, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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