bacld-q65fg3

 
Bacillus licheniformis; Bacillus sonorensis Lip_vut4 from Goat Rumen metagenome (esterase/lipase/thioesterase)

Comment
Other strains: Bacillus licheniformis (strain DSM 13 / ATCC 14580); Bacillus sonorensis L12


Relationship
Family BD-FAE
Block H
Bacillus licheniformis position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Bacillaceae: N E > Bacillus: N E > Bacillus subtilis group: N E > Bacillus licheniformis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
1 structure:
6NKF: Crystal Structure of the Bacillus licheniformis Lipase Lip_vut4 from Goat Rumen metagenome.
No kinetic



>3 Genbank links 3 more: AE017333, CP000002, AOFM01000009
3 UniProt : Q65FG3, M5NYQ7, T5HLP4
1 Structure : 6NKF
>3 UniProtTrembl links 2 more: Q65FG3, M5NYQ7, T5HLP4
>3 Interpro links 2 more: Q65FG3, M5NYQ7, T5HLP4
>3 Prodom links 2 more: Q65FG3, M5NYQ7, T5HLP4
>3 Pfam links 2 more: Q65FG3, M5NYQ7, T5HLP4
>3 PIRSF links 2 more: Q65FG3, M5NYQ7, T5HLP4
>3 SUPERFAM links 2 more: Q65FG3, M5NYQ7, T5HLP4
>3 QuickSwissBlast links 2 more: Q65FG3, M5NYQ7, T5HLP4
 
Sequence
Graphical view for this peptide sequence: bacld-q65fg3
Colored MSA for BD-FAE (raw)
MTNHIKEINWEQNTNSYIQLIPNIEYTKVEDTSLTLHLLVYRNPMDALFN
RKGNQETYPLIIYLQGCGWGWTKQDTSAFIPQLVPFVEQGYVVASVQYRG
SGEAVFPAQLHDVKTAVRFLKANAARYNIDPDRVGVWGDSSGGHLALLLG
LTEGIEEFEGPDEYRHVSSKVDAVADWFGPVDLLSMSKYPSIFDHDSPNS
PESKLIGGAVQENRVQAKQASPISYVHREAPPILIMHGDQDDVVPYQQSV
QLFEALIKEGHDALMYKINGAGHNGFTQAHTLDIVKSFFRKHLKPGKA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTNHIKEINWEQNTNSYIQLIPNIEYTKVEDTSLTLHLLVYRNPMDALFN
RKGNQETYPLIIYLQGCGWGWTKQDTSAFIPQLVPFVEQGYVVASVQYRG
SGEAVFPAQLHDVKTAVRFLKANAARYNIDPDRVGVWGDSSGGHLALLLG
LTEGIEEFEGPDEYRHVSSKVDAVADWFGPVDLLSMSKYPSIFDHDSPNS
PESKLIGGAVQENRVQAKQASPISYVHREAPPILIMHGDQDDVVPYQQSV
QLFEALIKEGHDALMYKINGAGHNGFTQAHTLDIVKSFFRKHLKPGKA

no DNA




References
    Title: Draft Whole-Genome Sequence of Bacillus sonorensis Strain L12, a Source of Nonribosomal Lipopeptides
    Adimpong DB, Sorensen KI, Nielsen DS, Thorsen L, Rasmussen TB, Derkx PM, Jespersen L
    Ref: Genome Announc, 1:e0009713, 2013 : PubMed

            

    Title: Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species
    Rey MW, Ramaiya P, Nelson BA, Brody-Karpin SD, Zaretsky EJ, Tang M, Lopez de Leon A, Xiang H, Gusti V and Berka RM <11 more author(s)>
    Ref: Genome Biol, 5:R77, 2004 : PubMed

            

    Title: The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential
    Veith B, Herzberg C, Steckel S, Feesche J, Maurer KH, Ehrenreich P, Baumer S, Henne A, Liesegang H and Gottschalk G <2 more author(s)>
    Ref: J Molecular Microbiology Biotechnol, 7:204, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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