Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: bacmd-d5dh38

Bacillus megaterium (strain DSM 319) Putative hydrolase

Relationship
Family|Bacterial_EstLip_FamX
Block| X
Position in NCBI Life Tree|Bacillus megaterium
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Bacillaceae: N E > Bacillus: N E > Bacillus megaterium: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP001982
1 UniProt : D5DH38
1 UniProt : D5DH38
1 Interpro : D5DH38
1 Prodom : D5DH38
1 Pfam : D5DH38
1 PIRSF : D5DH38
1 SUPERFAM : D5DH38
Sequence
Graphical view for this peptide sequence: bacmd-d5dh38
Colored MSA for Bacterial_EstLip_FamX (raw)
MKKVKAALPLAVSLALGLQVLPISTPIVQAEAAANAAHHSAKVEYKRANA
FLTNVANGKAKEAKRYFSRSLQSKMSEEDLKTWWTSLTAQFGAVKKIGTA
VQGEVNPVHRNIEIPIEFEHVSATLTVRFSQKREIDDWRIVPDERNFSFS
TPPYDTPKNYSEKQLSIGKAPYELPATLTLPTRSKHQNVPVVILVHGSGP
SDQDETFMSLKPFRDLASGLASQGIAVLRYNKRTYEHTAKMSGESKINVD
DETTDDAVLAVKAMAKQKGIDCGNIFLLGHSQGGMMMPRILKQTQDKSVR
GSILLAAPSRTLPELMLEQFTYLVSLNQLPKEQLTFFQQQFAILQDPSFS
PAQPPKGFLLGTPYFWYDLAHWHPAEVAKSQDTPLLFLQGARDYQVTTED
FEGWKQSLSQRSNTSFKLYPKLNHFFTEGTGGKSTPDEYAVSANIPSYII
DDIVKWVRETQK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKKVKAALPLAVSLALGLQVLPISTPIVQAEAAANAAHHSAKVEYKRANA
FLTNVANGKAKEAKRYFSRSLQSKMSEEDLKTWWTSLTAQFGAVKKIGTA
VQGEVNPVHRNIEIPIEFEHVSATLTVRFSQKREIDDWRIVPDERNFSFS
TPPYDTPKNYSEKQLSIGKAPYELPATLTLPTRSKHQNVPVVILVHGSGP
SDQDETFMSLKPFRDLASGLASQGIAVLRYNKRTYEHTAKMSGESKINVD
DETTDDAVLAVKAMAKQKGIDCGNIFLLGHSQGGMMMPRILKQTQDKSVR
GSILLAAPSRTLPELMLEQFTYLVSLNQLPKEQLTFFQQQFAILQDPSFS
PAQPPKGFLLGTPYFWYDLAHWHPAEVAKSQDTPLLFLQGARDYQVTTED
FEGWKQSLSQRSNTSFKLYPKLNHFFTEGTGGKSTPDEYAVSANIPSYII
DDIVKWVRETQK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer