Gene_Locus Report

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Gene_locus Report for: borpe-BP2146

Bordetella pertussis Bordetella parapertussis Bordetella bronchiseptica (Alcaligenes bronchisepticus) hypothetical protein

Comment
Q7VWQ5 Bordetella pertussis, Q7WAP1 Bordetella parapertussis, Q7WJU4Bordetella bronchiseptica


Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Bordetella pertussis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Alcaligenaceae: N E > Bordetella: N E > Bordetella pertussis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : BX640427, BX640417, BX640444
2 UniProt : Q7VWQ5, Q7WAP1
2 Interpro : Q7VWQ5, Q7WAP1
2 Prodom : Q7VWQ5, Q7WAP1
2 Pfam : Q7VWQ5, Q7WAP1
2 PIRSF : Q7VWQ5, Q7WAP1
2 SUPERFAM : Q7VWQ5, Q7WAP1
Sequence
Graphical view for this peptide sequence: borpe-BP2146
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MTPPARSSAAAPAQYADVHYADRPMRIEYALLAPERRDAPLLVFLHEGLG
SLAMWRDWPRRVCDAAGCRGLVYSRYGYGRSTVRPLDESRPIDYLHQQAA
QALPALFAALGIDARRDKPVLFGHSDGASIALLYAALCPDAVAGIAVAAP
HIYVEDITVANIAVALRAYRETTLRDRLARYHDDVDSTFASWTDTWLDPA
FRQWNIEAYLPAITCPVLAMQGVDDEYGTLEQIRGIRRLAPQTRLLEIQD
CGHSPHKDQPELVTRALAGFVGGLRRPA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTPPARSSAAAPAQYADVHYADRPMRIEYALLAPERRDAPLLVFLHEGLG
SLAMWRDWPRRVCDAAGCRGLVYSRYGYGRSTVRPLDESRPIDYLHQQAA
QALPALFAALGIDARRDKPVLFGHSDGASIALLYAALCPDAVAGIAVAAP
HIYVEDITVANIAVALRAYRETTLRDRLARYHDDVDSTFASWTDTWLDPA
FRQWNIEAYLPAITCPVLAMQGVDDEYGTLEQIRGIRRLAPQTRLLEIQD
CGHSPHKDQPELVTRALAGFVGGLRRPA


Reference
    Title: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
    Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD and Maskell DJ <43 more author(s)>
    Ref: Nat Genet, 35:32, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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