Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: botpv-r1gdw8

Botryosphaeria parva (strain UCR-NP2) (Grapevine canker fungus) (Neofusicoccum parvum). Putative abhydrolase domain-containing protein

Comment
only c-term Pfam Abhydrolase_1 236 472 n-term Ras


Relationship
Family|ABHD11-Acetyl_transferase
Block| X
Position in NCBI Life Tree|Botryosphaeria parva
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Pezizomycotina: N E > leotiomyceta: N E > dothideomyceta: N E > Dothideomycetes: N E > Dothideomycetes incertae sedis: N E > Botryosphaeriales: N E > Botryosphaeriaceae: N E > Neofusicoccum: N E > Neofusicoccum parvum: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : KB916452, XP_007586023
1 UniProt : R1GDW8
1 UniProt : R1GDW8
1 Interpro : R1GDW8
1 Pfam : R1GDW8
1 PIRSF : R1GDW8
1 SUPERFAM : R1GDW8
Sequence
Graphical view for this peptide sequence: botpv-r1gdw8
Colored MSA for ABHD11-Acetyl_transferase (raw)
MLARHAILRPFSTSRPLARLDLSYDLHEPPKGSATSVSENAPIIILHGLF
GSKRNNRSISKQLTRDLNRPIYAVDLRNHGDSPHDPRHDYTALAEDMEDF
IEHHKLSGSTLIGHSMGAKTVMAVALRRPELVRDVIPVDNAPVDAALKSD
FGKYVQGMKKVDAAKPKRQSDADAIMKPFAEELPVRQFLLSNLVRAPGND
HLQFKIPVAYLANALDNMADFPFKDPEATRFNKSALFIRGTKSHYVPDET
MPIIGRFFPLFKMKDVESGHWVVSENPEGFRQAVLEFLQDQE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLARHAILRPFSTSRPLARLDLSYDLHEPPKGSATSVSENAPIIILHGLF
GSKRNNRSISKQLTRDLNRPIYAVDLRNHGDSPHDPRHDYTALAEDMEDF
IEHHKLSGSTLIGHSMGAKTVMAVALRRPELVRDVIPVDNAPVDAALKSD
FGKYVQGMKKVDAAKPKRQSDADAIMKPFAEELPVRQFLLSNLVRAPGND
HLQFKIPVAYLANALDNMADFPFKDPEATRFNKSALFIRGTKSHYVPDET
MPIIGRFFPLFKMKDVESGHWVVSENPEGFRQAVLEFLQDQE


Reference
    Title: Draft Genome Sequence of Neofusicoccum parvum Isolate UCR-NP2, a Fungal Vascular Pathogen Associated with Grapevine Cankers
    Blanco-Ulate B, Rolshausen P, Cantu D
    Ref: Genome Announc, 1:, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer