Gene_Locus Report

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Gene_locus Report for: bpmdd-prxh

Mycobacteriophage D29, PRXH_BPMD2 AAC18502.1

Relationship
Family|Haloperoxidase
Block| X
Position in NCBI Life Tree|Mycobacteriophage D29
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> Viruses: N E > dsDNA viruses, no RNA stage: N E > Caudovirales: N E > Siphoviridae: N E > L5virus: N E > Mycobacterium virus D29: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AF022214
1 UniProt : O64252
1 Ncbi-nid : 3172250
1 Ncbi-pid : 3172309
1 UniProt : O64252
1 Interpro : O64252
1 Prodom : O64252
1 Pfam : O64252
1 PIRSF : O64252
1 SUPERFAM : O64252
Sequence
Graphical view for this peptide sequence: bpmdd-prxh
Colored MSA for Haloperoxidase (raw)
MKHETIVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGF
RVIALDAANHGRSGSLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGG
GMVVEIAARHPHRVAAAVLLDAAAGQEHHDNIKVGHYATLAFRAAKKLGE
AVTDIVGDGYEAMHLRDTGEKLSFLGMLRDSVSGLRFVRAAFALMKADTT
PLLHAMYRHGVPTAVLHGLHDQIVPYEAGLSTAKITNASFYGVDGFHSWM
LADPELAADLIALALLDLFPRRYITGAG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKHETIVLADGFRVGVSTVGTGAPLVFLHGLSVSAKAYEEMLTRLAEHGF
RVIALDAANHGRSGSLPTGHTVEDMTRVTLKTLDELDIHRAIFAGHSMGG
GMVVEIAARHPHRVAAAVLLDAAAGQEHHDNIKVGHYATLAFRAAKKLGE
AVTDIVGDGYEAMHLRDTGEKLSFLGMLRDSVSGLRFVRAAFALMKADTT
PLLHAMYRHGVPTAVLHGLHDQIVPYEAGLSTAKITNASFYGVDGFHSWM
LADPELAADLIALALLDLFPRRYITGAG


Reference
    Title: Genome structure of mycobacteriophage D29: implications for phage evolution
    Ford ME, Sarkis GJ, Belanger AE, Hendrix RW, Hatfull GF
    Ref: Journal of Molecular Biology, 279:143, 1998 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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