Gene_Locus Report

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Gene_locus Report for: burxy-a0a1i7rsb1

Bursaphelenchus xylophilus (Pinewood nematode worm) (Aphelenchoides xylophilus). Uncharacterized protein

Relationship
Family|ABHD12-PHARC
Block| X
Position in NCBI Life Tree|Bursaphelenchus xylophilus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Chromadorea: N E > Tylenchida: N E > Aphelenchina: N E > Aphelenchoidea: N E > Aphelenchoididae: N E > Bursaphelenchus: N E > Bursaphelenchus xylophilus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 UniProt : A0A1I7RSB1
1 UniProt : A0A1I7RSB1
1 Interpro : A0A1I7RSB1
1 Prodom : A0A1I7RSB1
1 Pfam : A0A1I7RSB1
1 PIRSF : A0A1I7RSB1
1 SUPERFAM : A0A1I7RSB1
Sequence
Graphical view for this peptide sequence: burxy-a0a1i7rsb1
Colored MSA for ABHD12-PHARC (raw)
MKRVGPRFGRFLLKVIAKQSTNYRSRSILAYVQLTSTHGVHNFNSLFVII
SPTGLKKARMKSFIRTLVWSSLPLLVLYTLAPLLVFLFPHFMQHLFFLNF
VKFPWREYHNLTEHGVDSVGLNFYIDGQALEDGYRPRLGLWHVLPYGLKP
ENGNVNQQTMEKILKEDNRPVVVYLHGNSFDRTTRHRIELYKILSKMGFH
VFALDYRGYGDSTGRPTEDGIVADSRCVFDYVRELIPDRPLLVWGHSMGT
GVATRLVSELSQEDKNPTALVLESPFNNLRDVINNHPFSAPFRFLPWFDH
LVIQPLIESGLIMQSDQRIKKITCPILVFHAADDHIIPIKLGKKLVESAE
KAGRNIRLVEFEPSRAFFHKYIHRAAEVPDIVMEFFEMSKSQQTKKSP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKRVGPRFGRFLLKVIAKQSTNYRSRSILAYVQLTSTHGVHNFNSLFVII
SPTGLKKARMKSFIRTLVWSSLPLLVLYTLAPLLVFLFPHFMQHLFFLNF
VKFPWREYHNLTEHGVDSVGLNFYIDGQALEDGYRPRLGLWHVLPYGLKP
ENGNVNQQTMEKILKEDNRPVVVYLHGNSFDRTTRHRIELYKILSKMGFH
VFALDYRGYGDSTGRPTEDGIVADSRCVFDYVRELIPDRPLLVWGHSMGT
GVATRLVSELSQEDKNPTALVLESPFNNLRDVINNHPFSAPFRFLPWFDH
LVIQPLIESGLIMQSDQRIKKITCPILVFHAADDHIIPIKLGKKLVESAE
KAGRNIRLVEFEPSRAFFHKYIHRAAEVPDIVMEFFEMSKSQQTKKSP


Reference
    Title: Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus
    Kikuchi T, Cotton JA, Dalzell JJ, Hasegawa K, Kanzaki N, McVeigh P, Takanashi T, Tsai IJ, Assefa SA and Berriman M <12 more author(s)>
    Ref: PLoS Pathog, 7:e1002219, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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