Gene_Locus Report

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Gene_locus Report for: caebe-g0pcn0

Caenorhabditis brenneri (Nematode worm) Putative uncharacterized protein

Relationship
Family|Carb_B_Nematoda
Block| C
Position in NCBI Life Tree|Caenorhabditis brenneri
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Chromadorea: N E > Rhabditida: N E > Rhabditoidea: N E > Rhabditidae: N E > Peloderinae: N E > Caenorhabditis: N E > Caenorhabditis brenneri: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : GL380249
1 UniProt : G0PCN0
1 UniProt : G0PCN0
1 Interpro : G0PCN0
1 Pfam : G0PCN0
1 PIRSF : G0PCN0
1 SUPERFAM : G0PCN0
Sequence
Graphical view for this peptide sequence: caebe-g0pcn0
Colored MSA for Carb_B_Nematoda (raw)
MGGFTSKHHHLTPVHNATCGPVKGVGYDQEDGSVVEGYLGIPYAEPPIGN
LRFKKPVLHHQWEEPLECIKFGPRCPQNDELLGQFVNTVGKSEEHCLSLN
VFTPKWESEEFVSLGEKYAINLNFQPNGFPVMVFIHGGGFAVHSSSNYGC
ATIARNLCTKNVIVVTINYRLGVLGFFTTGDEVCRGNLGLWDQTAALQWV
QNHISSFRGDPNNVTIFGQSAGGASVDLLCLSPHSRKLFNRAIPMAGNGE
CDFAVRTSEQQATLSKEFARYLGWEGDENDTEDLLRFIDEQPLYKIEMGI
NPRRGFKHSQAGSLYFVPNFDGDFFPKPLSQLRREVPHMQVMTGTTKYEG
LFFIALGALSRNPEGIKKFMARIFKECDYGEHADEVLNLAYDFYFKGIHS
KDQEKNIQQIVKFIGDYSINYGTYRFANTMAELEHDVYFYQFEYHNPGGF
GVFRWLLPFLGSTHCTEMRYILGKGIISKFRPNEHDKKMIEVMTTYFTNF
AKYGNPNGLTDGDWEKHDSFTPFRHFKIDLEESTMTEDYQDRRAELWDKI
RALNVARAEM
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MGGFTSKHHHLTPVHNATCGPVKGVGYDQEDGSVVEGYLGIPYAEPPIGN
LRFKKPVLHHQWEEPLECIKFGPRCPQNDELLGQFVNTVGKSEEHCLSLN
VFTPKWESEEFVSLGEKYAINLNFQPNGFPVMVFIHGGGFAVHSSSNYGC
ATIARNLCTKNVIVVTINYRLGVLGFFTTGDEVCRGNLGLWDQTAALQWV
QNHISSFRGDPNNVTIFGQSAGGASVDLLCLSPHSRKLFNRAIPMAGNGE
CDFAVRTSEQQATLSKEFARYLGWEGDENDTEDLLRFIDEQPLYKIEMGI
NPRRGFKHSQAGSLYFVPNFDGDFFPKPLSQLRREVPHMQVMTGTTKYEG
LFFIALGALSRNPEGIKKFMARIFKECDYGEHADEVLNLAYDFYFKGIHS
KDQEKNIQQIVKFIGDYSINYGTYRFANTMAELEHDVYFYQFEYHNPGGF
GVFRWLLPFLGSTHCTEMRYILGKGIISKFRPNEHDKKMIEVMTTYFTNF
AKYGNPNGLTDGDWEKHDSFTPFRHFKIDLEESTMTEDYQDRRAELWDKI
RALNVARAEM



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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