Gene_locus Report for: camfo-e2a8t9 Camponotus floridanus (Florida carpenter ant). Uncharacterized protein ABHD18 C4orf29-like protein
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Hymenoptera: N E > Apocrita: N E > Aculeata: N E > Vespoidea: N E > Formicidae: N E > Formicinae: N E > Camponotini: N E > Camponotus: N E > Camponotus floridanus: N E ABHD11-Acetyl_transferase :
camfo-e2ax69 Camponotus floridanus (Florida carpenter ant). Abhydrolase domain-containing protein 11 .
ABHD12-PHARC :
camfo-e2a7b9 Camponotus floridanus (Florida carpenter ant). Abhydrolase domain-containing protein 12 .
ABHD13-BEM46 :
camfo-e2a482 Camponotus floridanus (Florida carpenter ant). Abhydrolase domain-containing protein 13 .
abh_upf0017 :
camfo-e2az30 Camponotus floridanus (Florida carpenter ant) Abhydrolase domain-containing protein 3 .
ACHE :
9hyme-e2axr7 Camponotus floridanus (Florida carpenter ant) (ant) acetylcholinesterase 1 (ace) .
Acidic_Lipase :
camfo-e2a1a9 Camponotus floridanus (Florida carpenter ant) Lipase ,
camfo-e2a925 Camponotus floridanus (Florida carpenter ant) Lipase ,
camfo-e2ahe1 Camponotus floridanus (Florida carpenter ant) Lipase ,
camfo-e2ar09 Camponotus floridanus (Florida carpenter ant) Lipase ,
camfo-e2av24 Camponotus floridanus (Florida carpenter ant) Lipase 1 ,
camfo-e2axp8 Camponotus floridanus (Florida carpenter ant) Lipase ,
camfo-e2b1u7 Camponotus floridanus (Florida carpenter ant) Lipase ,
camfo-e2b1v1 Camponotus floridanus (Florida carpenter ant) Lipase 3 .
Carb_B_Arthropoda :
9hyme-e1zye4 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2a4n5 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2a4n6 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2adw2 Camponotus floridanus (Florida carpenter ant) Esterase E4 ,
9hyme-e2adw3 Camponotus floridanus (Florida carpenter ant) Carboxylesterase 3 ,
9hyme-e2adw4 Camponotus floridanus (Florida carpenter ant) Carboxylesterase UNQ440/PRO873-like protein ,
9hyme-e2adw5 Camponotus floridanus (Florida carpenter ant) Carboxylesterase UNQ440/PRO873-like protein ,
9hyme-e2adw7 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2adw9 Camponotus floridanus (Florida carpenter ant) Esterase E4 ,
9hyme-e2adx0 Camponotus floridanus (Florida carpenter ant) Juvenile hormone esterase ,
9hyme-e2ai90 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2ajl7 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2ajl8 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2ajl9 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2am67 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2am68 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2any0 Camponotus floridanus (Florida carpenter ant) Esterase FE4 ,
9hyme-e2ara9 Camponotus floridanus (Florida carpenter ant) Esterase E4 .
DPP4N_Peptidase_S9 :
camfo-e1zze7 Camponotus floridanus (Florida carpenter ant) (Florida carpenter ant) Dipeptidyl peptidase 4 ,
camfo-e2af07 Camponotus floridanus (Florida carpenter ant) (Florida carpenter ant) Dipeptidyl aminopeptidase-like protein 6 ,
camfo-e2af09 Camponotus floridanus (Florida carpenter ant) (Florida carpenter ant) Dipeptidyl peptidase 4 ,
camfo-e2am62 Camponotus floridanus (Florida carpenter ant) (Florida carpenter ant) Dipeptidyl peptidase 9 ,
camfo-e2b0g1 Camponotus floridanus (Florida carpenter ant) (Florida carpenter ant) Dipeptidyl peptidase 4 .
Gliotactin :
9hyme-e2a0n6 Camponotus floridanus (Florida carpenter ant) Neuroligin-4, X-linked .
Kynurenine-formamidase :
camfo-e1zxe8 Camponotus floridanus (Florida carpenter ant). N-formylkynurenine formamidase .
Ndr_family :
camfo-e2ad05 Camponotus floridanus (Florida carpenter ant) Protein NDRG3 .
Neuroligin :
9hyme-e2a3j7 Camponotus floridanus (Florida carpenter ant) Neuroligin-1 .
Neurotactin :
9hyme-e2a8v4 Camponotus floridanus (Florida carpenter ant) Neurotactin .
NLS3-Tex30 :
camfo-e2ap71 Camponotus floridanus (Florida carpenter ant) Uncharacterized protein KIAA1310 .
OtherNon-catalytic_C :
9hyme-e2a9y2 Camponotus floridanus (Florida carpenter ant) Carboxylesterase 3 ,
9hyme-e2acx6 Camponotus floridanus (Florida carpenter ant) esterase .
Pancreatic_lipase :
camfo-e1zyd7 Camponotus floridanus (Florida carpenter ant); Lasius niger (Black garden ant). Pancreatic triacylglycerol lipase ,
camfo-e1zyd8 Camponotus floridanus (Florida carpenter ant). Pancreatic lipase-related protein 2 .
Pectinacetylesterase-Notum :
camfo-e2arj6 Camponotus floridanus (Florida carpenter ant) (Florida carpenter ant) Protein notum-like protein .
PPase_methylesterase_euk :
camfo-e1zwv0 Camponotus floridanus (Florida carpenter ant) Protein phosphatase methylesterase 1 .
Prolylcarboxypeptidase :
camfo-e1zxk2 Camponotus floridanus (Florida carpenter ant) Lysosomal Pro-X carboxypeptidase ,
camfo-e2a6b9 Camponotus floridanus (Florida carpenter ant) Putative serine protease F56F10.1 ,
camfo-e2ask6 Camponotus floridanus (Florida carpenter ant) Putative serine protease K12H4.7 .
Valacyclovir-hydrolase :
camfo-e2aqx6 Camponotus floridanus (Florida carpenter ant) Valacyclovir hydrolase Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: camfo-e2a8t9 Colored MSA for ABHD18 (raw)
MPLSRLDAVYRSILLTKFFAKGWGNPQNLKKKVIANREACYNMIPLDYPV
EITKDEVWSDCHIIEGQFETPFEKHLPGLMPDQAKIAYFQVILPTKWSSH
KIKPICLHLAGTGDHFFWRRRNLIAKPLLKETGIASILLENPFYGLRKPN
NQIRSSLNNVCDIFIMGGCLIMESIVLLNWCEQQGFGPLGLTGLSMGGHM
ASLAATNWPKPISLVPCLSWSSASPVFTEGVMSASINWSLLETQYFSNKI
YQNDLAKMVKIIDNDDAFLAGQHFVQHYPASMKRIDKLRKDSEESCKDNN
TVDMKNCTNSINNISDNNISVKCESENESNQLQCQIAEEKAAAKIFPLSL
ISNKFKPKDPNALKGVCLLPVSKHPLFSDNKWREHEALQFMRGVMDECTH
LKNFEIPVDTELIIAVCARDDAYVPRGHCMSLEKIWPGAEIRYIDAGHVS
AYLLHQKVFRSTIAESIQRSLKKYPVETS
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M P L S R L D A V Y R S I L L T K F F A K G W G N P Q N L K K K V I A N R E A C Y N M I P L D Y P V E I T K D E V W S D C H I I E G Q F E T P F E K H L P G L M P D Q A K I A Y F Q V I L P T K W S S H K I K P I C L H L A G T G D H F F W R R R N L I A K P L L K E T G I A S I L L E N P F Y G L R K P N N Q I R S S L N N V C D I F I M G G C L I M E S I V L L N W C E Q Q G F G P L G L T G L S M G G H M A S L A A T N W P K P I S L V P C L S W S S A S P V F T E G V M S A S I N W S L L E T Q Y F S N K I Y Q N D L A K M V K I I D N D D A F L A G Q H F V Q H Y P A S M K R I D K L R K D S E E S C K D N N T V D M K N C T N S I N N I S D N N I S V K C E S E N E S N Q L Q C Q I A E E K A A A K I F P L S L I S N K F K P K D P N A L K G V C L L P V S K H P L F S D N K W R E H E A L Q F M R G V M D E C T H L K N F E I P V D T E L I I A V C A R D D A Y V P R G H C M S L E K I W P G A E I R Y I D A G H V S A Y L L H Q K V F R S T I A E S I Q R S L K K Y P V E T S
Reference
Title: Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltatorBonasio R , Zhang G , Ye C , Mutti NS , Fang X , Qin N , Donahue G , Yang P , Li Q and Liebig J <6 more author(s)> Bonasio R , Zhang G , Ye C , Mutti NS , Fang X , Qin N , Donahue G , Yang P , Li Q , Li C , Zhang P , Huang Z , Berger SL , Reinberg D , Wang J , Liebig J (- 6) Ref: Science, 329 :1068, 2010 : PubMed Abstract ESTHER: Bonasio_2010_Science_329_1068 PubMedSearch: Bonasio 2010 Science 329 1068 PubMedID: 20798317 Gene_locus related to this paper: 9hyme-e1zye4 ,
9hyme-e2a0n6 ,
9hyme-e2a3j7 ,
9hyme-e2a4n5 ,
9hyme-e2a4n6 ,
9hyme-e2a8v4 ,
9hyme-e2a9y2 ,
9hyme-e2acx6 ,
9hyme-e2adw2 ,
9hyme-e2adw3 ,
9hyme-e2adw4 ,
9hyme-e2adw5 ,
9hyme-e2adw7 ,
9hyme-e2adw9 ,
9hyme-e2adx0 ,
9hyme-e2ai90 ,
9hyme-e2ajl7 ,
9hyme-e2ajl8 ,
9hyme-e2ajl9 ,
9hyme-e2am67 ,
9hyme-e2am68 ,
9hyme-e2any0 ,
9hyme-e2ara9 ,
9hyme-e2axr7 ,
9hyme-e2b2q4 ,
9hyme-e2b493 ,
9hyme-e2bc53 ,
9hyme-e2bft9 ,
9hyme-e2bfu1 ,
9hyme-e2bfu2 ,
9hyme-e2bi28 ,
9hyme-e2bn41 ,
9hyme-e2by80 ,
9hyme-e2c2j5 ,
camfo-e1zwv0 ,
camfo-e1zxk2 ,
camfo-e1zze7 ,
camfo-e2a1a9 ,
camfo-e2a6b9 ,
camfo-e2a925 ,
camfo-e2af07 ,
camfo-e2af09 ,
camfo-e2ahe1 ,
camfo-e2am62 ,
camfo-e2ap71 ,
camfo-e2aqx6 ,
camfo-e2ar09 ,
camfo-e2arj6 ,
camfo-e2ask6 ,
camfo-e2av24 ,
camfo-e2axp8 ,
camfo-e2az30 ,
camfo-e2b0g1 ,
camfo-e2b1u7 ,
camfo-e2b1v1 ,
harsa-e2b4e6 ,
harsa-e2b4y5 ,
harsa-e2b5u0 ,
harsa-e2b6u3 ,
harsa-e2b8w0 ,
harsa-e2b8w2 ,
harsa-e2b370 ,
harsa-e2b563 ,
harsa-e2bfn3 ,
harsa-e2bh58 ,
harsa-e2bh77 ,
harsa-e2bnc8 ,
harsa-e2bng4 ,
harsa-e2bnh3 ,
harsa-e2btb0 ,
harsa-e2buf0 ,
harsa-e2bva8 ,
harsa-e2bwj6 ,
harsa-e2bwn1 ,
harsa-e2c1r6 ,
harsa-e2c1r7 ,
harsa-e2c5m6 ,
harsa-e2c6m2 ,
harsa-e2c618 ,
camfo-e2ad05 ,
harsa-e2ca28 ,
camfo-e2a8t9 ,
harsa-e2blx5 ,
camfo-e1zxe8 ,
harsa-e2bmi6 ,
harsa-e2c8h0 ,
camfo-e2a7b9 ,
camfo-e1zyd7 ,
camfo-e1zyd8 ,
harsa-e2c2j9 ,
harsa-e2bmu7 ,
camfo-e2ax69 ,
camfo-e2a482 ,
harsa-e2c147 Abstract
The organized societies of ants include short-lived worker castes displaying specialized behavior and morphology and long-lived queens dedicated to reproduction. We sequenced and compared the genomes of two socially divergent ant species: Camponotus floridanus and Harpegnathos saltator. Both genomes contained high amounts of CpG, despite the presence of DNA methylation, which in non-Hymenoptera correlates with CpG depletion. Comparison of gene expression in different castes identified up-regulation of telomerase and sirtuin deacetylases in longer-lived H. saltator reproductives, caste-specific expression of microRNAs and SMYD histone methyltransferases, and differential regulation of genes implicated in neuronal function and chemical communication. Our findings provide clues on the molecular differences between castes in these two ants and establish a new experimental model to study epigenetics in aging and behavior.
Other Papers
