Gene_locus Report for: canga-q6fkm9 Candida glabrata (Yeast) (Torulopsis glabrata) similar to tr|q08448 saccharomyces cerevisiae yor059c
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Saccharomycotina: N E > Saccharomycetes: N E > Saccharomycetales: N E > Saccharomycetaceae: N E > Nakaseomyces: N E > Nakaseomyces/Candida clade: N E > [Candida] glabrata: N E 6_AlphaBeta_hydrolase :
canga-q6fjl0 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome m complete sequence ,
canga-q6fle9 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p53925 saccharomyces cerevisiae ynl115c ,
canga-q6fwm0 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p47139 saccharomyces cerevisiae yjr098c .
A85-EsteraseD-FGH :
canga-q6fpa8 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p40363 saccharomyces cerevisiae yjl068c .
ABHD11-Acetyl_transferase :
canga-q6fmz4 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p53219 saccharomyces cerevisiae ygr031w ,
canga-q6ftu0 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p53208 saccharomyces cerevisiae ygr015c .
ABHD13-BEM46 :
canga-q6fjr8 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p42840 saccharomyces cerevisiae ynl320w .
abh_upf0017 :
canga-q6fjh6 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome m complete sequence ,
canga-q6fuf8 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|q03649 saccharomyces cerevisiae ymr210w .
Acidic_Lipase :
canga-q6fvu3 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome d complete sequence ,
canga-q6fw36 Candida glabrata (Yeast) (Torulopsis glabrata) similar to tr|q07950 saccharomyces cerevisiae ylr020c ,
canga-q6fw94 Candida glabrata (Yeast) (Torulopsis glabrata) triacylglycerol lipase .
Arb2_domain :
canga-q6fpj0 Candida glabrata (Yeast) (Torulopsis glabrata). Uncharacterized protein .
Carboxypeptidase_S10 :
canga-q6fik7 Candida glabrata (Yeast) (Torulopsis glabrata) carboxypeptidase y ,
canga-q6ftm9 Candida glabrata (Yeast) (Torulopsis glabrata) carboxypeptidase .
CGI-58_ABHD5_ABHD4 :
canga-q6fiv5 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|q12385 saccharomyces cerevisiae ylr099c ict1 ,
canga-q6flb5 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p53264 saccharomyces cerevisiae ygr110w ,
canga-q6fxc7 Candida glabrata (Yeast) (Torulopsis glabrata) similar to tr|q04623 saccharomyces cerevisiae ydr125c ecm18 .
Dienelactone_hydrolase :
canga-q6fl14 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|q07505 saccharomyces cerevisiae ydl086w ,
canga-q6fp28 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p39721 saccharomyces cerevisiae yal049c ,
canga-q6frt7 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p39721 saccharomyces cerevisiae yal049c .
DPP4N_Peptidase_S9 :
canga-q6flk8 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome l complete sequence ,
canga-q6fpv7 Candida glabrata (Yeast) (Torulopsis glabrata) aminopeptidase .
Duf_676 :
canga-q6fj11 Candida glabrata (Yeast) (Torulopsis glabrata) similar to tr|q04093 saccharomyces cerevisiae ydr444w ,
canga-q6fr97 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome h complete sequence ,
canga-q6fv41 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome e complete sequence .
Duf_726 :
canga-q6fly1 Candida glabrata (Yeast) (Torulopsis glabrata) Similar to uniprot|P43564 Saccharomyces cerevisiae YFL034w .
FSH1 :
canga-q6fiw8 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|q05015 saccharomyces cerevisiae ymr222c ,
canga-q6fkj6 Candida glabrata (Yeast) (Torulopsis glabrata) similar to tr|q99369 saccharomyces cerevisiae yor280c ,
canga-q6fpw6 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p38777 saccharomyces cerevisiae yhr049w .
Fusarinine_C_esterase_sidJ :
canga-q6fxd7 Candida glabrata (Yeast) (Torulopsis glabrata). candida glabrata strain cbs138 chromosome b complete sequence .
Homoserine_transacetylase :
canga-q6fnx4 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome j complete sequence .
LIDHydrolase :
canga-q6fku7 Candida glabrata (Yeast) (Torulopsis glabrata) Similar to uniprot|Q06522 Saccharomyces cerevisiae YPR147c .
Lipase_3 :
canga-q6fpi6 Candida glabrata (Yeast) (Torulopsis glabrata) putative lipase atg15 (EC 3.1.1.3) (autophagy-related protein 15) ,
canga-q6fwk6 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p47145 saccharomyces cerevisiae yjr107w .
LYsophospholipase_carboxylesterase :
canga-apth1 Candida glabrata (Yeast) (Torulopsis glabrata) similar to tr|q12354 saccharomyces cerevisiae ylr118c acyl-protein thioesterase 1 (EC 3.1.2.-) .
Monoglyceridelipase_lysophospholip :
canga-q6ftz9 Candida glabrata (Yeast) (Torulopsis glabrata) similar to sp|p28321 saccharomyces cerevisiae ykl094w yju3 .
PC-sterol_acyltransferase :
canga-q6fqj3 Candida glabrata (Yeast) (Torulopsis glabrata) lro1 .
PGAP1 :
canga-q6fly9 Candida glabrata (Yeast) (Torulopsis glabrata) candida glabrata strain cbs138 chromosome k complete sequence .
PPase_methylesterase_euk :
canga-ppme1 Candida glabrata (Yeast) (Torulopsis glabrata) protein phosphatase methylesterase 1 (EC 3.1.1.-) (pme-1) .
Steryl_acetyl_hydrolase :
canga-q6ftv9 Candida glabrata (Yeast) (Torulopsis glabrata) Similar to uniprot|P53324 Saccharomyces cerevisiae YGR263c Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can
retrieve all strain data
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) [Candida] glabrata CBS 138:
N ,
E .
Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: canga-q6fkm9 Colored MSA for Duf_676 (raw)
MGQDKHLFVLIHGLWGNYKHMKSLEKVLDATLNGKKSGKDKDYVFFLPKQ
NATFKTFDGIEIIGYRTLLELCEFMKEFKDGNITKISFVGYSLGGLVARF
VVGKMYSECNDIFGNIERCIFMTMATPHLGIQFYNPLGYLHRKLLFSTFT
GLGSTILGKSGRELFIANSSNDILVRLSEGKYIEALEEFNHRILFANVKN
DRTVAFFTGFIADVDPFLESDNRIKFDFESKIPGKSYSRAKPRIVDLNKL
DSNVKKEKTQHNPVKYWSRTLLLLVLVVFLIVPFAFFFNIGGTIYSYVAT
WRYRKMLKSNEFPKLIKEKAGFSDQLKGYMSDAYSNVMSTVIDDDSQIEN
EDTPKFVDEDSNSWTNLLSKYTHHGGTEEKWKNKFKKMPLTKERQLIMRN
LNQLTWIKIPIYVKFLNSHGGIVARNGISESTAATSVGSVEFAGQLVSYL
IHNANNK
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M G Q D K H L F V L I H G L W G N Y K H M K S L E K V L D A T L N G K K S G K D K D Y V F F L P K Q N A T F K T F D G I E I I G Y R T L L E L C E F M K E F K D G N I T K I S F V G Y S L G G L V A R F V V G K M Y S E C N D I F G N I E R C I F M T M A T P H L G I Q F Y N P L G Y L H R K L L F S T F T G L G S T I L G K S G R E L F I A N S S N D I L V R L S E G K Y I E A L E E F N H R I L F A N V K N D R T V A F F T G F I A D V D P F L E S D N R I K F D F E S K I P G K S Y S R A K P R I V D L N K L D S N V K K E K T Q H N P V K Y W S R T L L L L V L V V F L I V P F A F F F N I G G T I Y S Y V A T W R Y R K M L K S N E F P K L I K E K A G F S D Q L K G Y M S D A Y S N V M S T V I D D D S Q I E N E D T P K F V D E D S N S W T N L L S K Y T H H G G T E E K W K N K F K K M P L T K E R Q L I M R N L N Q L T W I K I P I Y V K F L N S H G G I V A R N G I S E S T A A T S V G S V E F A G Q L V S Y L I H N A N N K
Reference
Title: Genome evolution in yeastsDujon B , Sherman D , Fischer G , Durrens P , Casaregola S , Lafontaine I , De Montigny J , Marck C , Neuveglise C and Souciet JL <57 more author(s)> Dujon B , Sherman D , Fischer G , Durrens P , Casaregola S , Lafontaine I , De Montigny J , Marck C , Neuveglise C , Talla E , Goffard N , Frangeul L , Aigle M , Anthouard V , Babour A , Barbe V , Barnay S , Blanchin S , Beckerich JM , Beyne E , Bleykasten C , Boisrame A , Boyer J , Cattolico L , Confanioleri F , de Daruvar A , Despons L , Fabre E , Fairhead C , Ferry-Dumazet H , Groppi A , Hantraye F , Hennequin C , Jauniaux N , Joyet P , Kachouri R , Kerrest A , Koszul R , Lemaire M , Lesur I , Ma L , Muller H , Nicaud JM , Nikolski M , Oztas S , Ozier-Kalogeropoulos O , Pellenz S , Potier S , Richard GF , Straub ML , Suleau A , Swennen D , Tekaia F , Wesolowski-Louvel M , Westhof E , Wirth B , Zeniou-Meyer M , Zivanovic I , Bolotin-Fukuhara M , Thierry A , Bouchier C , Caudron B , Scarpelli C , Gaillardin C , Weissenbach J , Wincker P , Souciet JL (- 57) Ref: Nature, 430 :35, 2004 : PubMed Abstract ESTHER: Dujon_2004_Nature_430_35 PubMedSearch: Dujon 2004 Nature 430 35 PubMedID: 15229592 Gene_locus related to this paper: canga-apth1 ,
canga-ppme1 ,
canga-q6fik7 ,
canga-q6fiv5 ,
canga-q6fiw8 ,
canga-q6fj11 ,
canga-q6fjh6 ,
canga-q6fjl0 ,
canga-q6fjr8 ,
canga-q6fkj6 ,
canga-q6fkm9 ,
canga-q6fku7 ,
canga-q6fl14 ,
canga-q6flb5 ,
canga-q6fle9 ,
canga-q6flk8 ,
canga-q6fly1 ,
canga-q6fly9 ,
canga-q6fmz4 ,
canga-q6fnx4 ,
canga-q6fp28 ,
canga-q6fpa8 ,
canga-q6fpi6 ,
canga-q6fpv7 ,
canga-q6fpw6 ,
canga-q6fqj3 ,
canga-q6fr97 ,
canga-q6frt7 ,
canga-q6ftm9 ,
canga-q6ftu0 ,
canga-q6ftv9 ,
canga-q6ftz9 ,
canga-q6fuf8 ,
canga-q6fv41 ,
canga-q6fvu3 ,
canga-q6fw36 ,
canga-q6fw94 ,
canga-q6fwk6 ,
canga-q6fwm0 ,
canga-q6fxc7 ,
canga-q6fxd7 ,
debha-apth1 ,
debha-atg15 ,
debha-b5rtk1 ,
debha-b5rub4 ,
debha-b5rue8 ,
debha-b5rue9 ,
debha-bna7 ,
debha-ppme1 ,
debha-q6bgx3 ,
debha-q6bh69 ,
debha-q6bhb8 ,
debha-q6bhc1 ,
debha-q6bhd0 ,
debha-q6bhj7 ,
debha-q6bi97 ,
debha-q6biq7 ,
debha-q6bj53 ,
debha-q6bkd8 ,
debha-q6bks1 ,
debha-q6bky4 ,
debha-q6bm63 ,
debha-q6bmh3 ,
debha-q6bn89 ,
debha-q6bnj6 ,
debha-q6bp08 ,
debha-q6bpb4 ,
debha-q6bpc0 ,
debha-q6bpc6 ,
debha-q6bq10 ,
debha-q6bq11 ,
debha-q6bqd9 ,
debha-q6bqj6 ,
debha-q6br33 ,
debha-q6br93 ,
debha-q6brg1 ,
debha-q6brw7 ,
debha-q6bs23 ,
debha-q6bsc3 ,
debha-q6bsl8 ,
debha-q6bsx6 ,
debha-q6bta5 ,
debha-q6bty5 ,
debha-q6btz0 ,
debha-q6bu73 ,
debha-q6buk9 ,
debha-q6but7 ,
debha-q6bvc4 ,
debha-q6bvg4 ,
debha-q6bvg8 ,
debha-q6bvp4 ,
debha-q6bw82 ,
debha-q6bxr7 ,
debha-q6bxu9 ,
debha-q6bym5 ,
debha-q6byn7 ,
debha-q6bzj8 ,
debha-q6bzk2 ,
debha-q6bzm5 ,
klula-apth1 ,
klula-ppme1 ,
klula-q6cin9 ,
klula-q6ciu6 ,
klula-q6cj47 ,
klula-q6cjc8 ,
klula-q6cjq9 ,
klula-q6cjs1 ,
klula-q6cjv9 ,
klula-q6ckd7 ,
klula-q6ckk4 ,
klula-q6ckx4 ,
klula-q6cl20 ,
klula-q6clm1 ,
klula-q6cly8 ,
klula-q6clz7 ,
klula-q6cm48 ,
klula-q6cm49 ,
klula-q6cmt5 ,
klula-q6cn71 ,
klula-q6cnm1 ,
klula-q6cr74 ,
klula-q6cr90 ,
klula-q6crs0 ,
klula-q6crv8 ,
klula-q6crz9 ,
klula-q6cst8 ,
klula-q6csv8 ,
klula-q6ctp8 ,
klula-q6cu02 ,
klula-q6cu78 ,
klula-q6cu79 ,
klula-q6cuv3 ,
klula-q6cvd3 ,
klula-q6cw70 ,
klula-q6cw92 ,
klula-q6cwu7 ,
klula-q6cx84 ,
klula-q6cxa3 ,
klula-q6cy41 ,
yarli-apth1 ,
yarli-atg15 ,
yarli-BST1B ,
yarli-lip2 ,
yarli-LIP3 ,
yarli-LIP4 ,
yarli-LIP5 ,
yarli-LIP7 ,
yarli-LIP8 ,
yarli-lipa1 ,
yarli-ppme1 ,
yarli-q6bzp1 ,
yarli-q6bzv7 ,
yarli-q6c1f5 ,
yarli-q6c1f7 ,
yarli-q6c1r3 ,
yarli-q6c2z2 ,
yarli-q6c3h1 ,
yarli-q6c3i6 ,
yarli-q6c3l1 ,
yarli-q6c3u6 ,
yarli-q6c4h8 ,
yarli-q6c5j1 ,
yarli-q6c5m4 ,
yarli-q6c6m4 ,
yarli-q6c6p7 ,
yarli-q6c6v2 ,
yarli-q6c7h3 ,
yarli-q6c7i7 ,
yarli-q6c7j5 ,
yarli-q6c7y6 ,
yarli-q6c8m4 ,
yarli-q6c8q4 ,
yarli-q6c8u4 ,
yarli-q6c8y2 ,
yarli-q6c9r0 ,
yarli-q6c9r1 ,
yarli-q6c9u0 ,
yarli-q6c9v4 ,
yarli-q6c209 ,
yarli-q6c225 ,
yarli-q6c493 ,
yarli-q6c598 ,
yarli-q6c687 ,
yarli-q6c822 ,
yarli-q6cau6 ,
yarli-q6cax2 ,
yarli-q6caz1 ,
yarli-q6cb63 ,
yarli-q6cba7 ,
yarli-q6cbb1 ,
yarli-q6cbe6 ,
yarli-q6cby1 ,
yarli-q6ccr0 ,
yarli-q6cdg1 ,
yarli-q6cdi6 ,
yarli-q6cdv9 ,
yarli-q6ce37 ,
yarli-q6ceg0 ,
yarli-q6cep3 ,
yarli-q6cey5 ,
yarli-q6cf60 ,
yarli-q6cfp3 ,
yarli-q6cfx2 ,
yarli-q6cg13 ,
yarli-q6cg27 ,
yarli-q6cgj3 ,
yarli-q6chb8 ,
yarli-q6ci59 ,
yarli-q6c748 ,
canga-q6fpj0 ,
klula-q6cp11 ,
yarli-q6c4p0 ,
debha-q6btp5 ,
debha-kex1 Abstract
Identifying the mechanisms of eukaryotic genome evolution by comparative genomics is often complicated by the multiplicity of events that have taken place throughout the history of individual lineages, leaving only distorted and superimposed traces in the genome of each living organism. The hemiascomycete yeasts, with their compact genomes, similar lifestyle and distinct sexual and physiological properties, provide a unique opportunity to explore such mechanisms. We present here the complete, assembled genome sequences of four yeast species, selected to represent a broad evolutionary range within a single eukaryotic phylum, that after analysis proved to be molecularly as diverse as the entire phylum of chordates. A total of approximately 24,200 novel genes were identified, the translation products of which were classified together with Saccharomyces cerevisiae proteins into about 4,700 families, forming the basis for interspecific comparisons. Analysis of chromosome maps and genome redundancies reveal that the different yeast lineages have evolved through a marked interplay between several distinct molecular mechanisms, including tandem gene repeat formation, segmental duplication, a massive genome duplication and extensive gene loss.
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