Gene_Locus Report

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Gene_locus Report for: capan-PepEST

Capsicum annuum (and Capsicum chinense (Scotch bonnet) (Bonnet pepper)) (Bell pepper) pepper esterase (PepEST) mRNA, complete cds

Comment
Other strains: Capsicum chinense


Relationship
Family|Plant_carboxylesterase
Block| H
Position in NCBI Life Tree|Capsicum annuum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > asterids: N E > lamiids: N E > Solanales: N E > Solanaceae: N E > Solanoideae: N E > Capsiceae: N E > Capsicum: N E > Capsicum annuum: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AF072533, AAF77578, AJ879119
2 UniProt : Q5DUH2, Q9LM08
1 Ncbi-nid : 8574454
1 Ncbi-pid : 8574455
2 UniProt : Q5DUH2, Q9LM08
2 Interpro : Q5DUH2, Q9LM08
2 Prodom : Q5DUH2, Q9LM08
2 Pfam : Q5DUH2, Q9LM08
2 PIRSF : Q5DUH2, Q9LM08
2 SUPERFAM : Q5DUH2, Q9LM08
Sequence
Graphical view for this peptide sequence: capan-PepEST
Colored MSA for Plant_carboxylesterase (raw)
MASQSFVPPIFENPFLNIEELAGDTIVRKPEPLTQANSDPNGTSLVVSKD
VDLDINKKTWLRIYVPQRIITNHNDDEKLPVIFYYHGGGFVFFHANSFAW
DLFCQGLAGNLGAMVISLEFRLAPENRLPAAYDDAMDGLYWIKSTQDEWV
RKYSDLSNVYLFGSSCGGNIAYHAGLRVAAGAYKELEPVKIKGLILHQPY
FSGKNRTESEEKLKDDQLLPLHAIDKMFDLSLPKGTLDHDHEYSNPFLNG
GSKHLDDVIAQGWKILVTGVSGDPLVDNARNFANFMEEKGIKTFKLFGDG
YHAIEGFEPSKAAALIGATKDFICATTN
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MASQSFVPPIFENPFLNIEELAGDTIVRKPEPLTQANSDPNGTSLVVSKD
VDLDINKKTWLRIYVPQRIITNHNDDEKLPVIFYYHGGGFVFFHANSFAW
DLFCQGLAGNLGAMVISLEFRLAPENRLPAAYDDAMDGLYWIKSTQDEWV
RKYSDLSNVYLFGSSCGGNIAYHAGLRVAAGAYKELEPVKIKGLILHQPY
FSGKNRTESEEKLKDDQLLPLHAIDKMFDLSLPKGTLDHDHEYSNPFLNG
GSKHLDDVIAQGWKILVTGVSGDPLVDNARNFANFMEEKGIKTFKLFGDG
YHAIEGFEPSKAAALIGATKDFICATTN


References
    Title: A Colletotrichum gloeosporioides-induced esterase gene of nonclimacteric pepper (Capsicum annuum) fruit during ripening plays a role in resistance against fungal infection
    Ko MK, Jeon WB, Kim KS, Lee HH, Seo HH, Kim YS, Oh BJ
    Ref: Plant Mol Biol, 58:529, 2005 : PubMed

            

    Title: The carboxylesterase gene family from Arabidopsis thaliana
    Marshall SD, Putterill JJ, Plummer KM, Newcomb RD
    Ref: Journal of Molecular Evolution, 57:487, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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