Gene_Locus Report

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Gene_locus Report for: celad-e6x777

Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) Alpha/beta hydrolase fold protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Cellulophaga algicola
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > FCB group: N E > Bacteroidetes/Chlorobi group: N E > Bacteroidetes: N E > Flavobacteriia: N E > Flavobacteriales: N E > Flavobacteriaceae: N E > Cellulophaga: N E > Cellulophaga algicola: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP002453
1 UniProt : E6X777
1 UniProt : E6X777
1 Interpro : E6X777
1 Prodom : E6X777
1 Pfam : E6X777
1 PIRSF : E6X777
1 SUPERFAM : E6X777
Sequence
Graphical view for this peptide sequence: celad-e6x777
Colored MSA for abh_upf0017 (raw)
MPLVASTYNPPILFKNGHLSTIYSGIFRKVDGVAQERERITLFDTDFLDL
DWSFASQKSNKVMIILHGLEGSAQRPYIMGSAKVFNQNGYDACAINLRSC
SGAPNLLFRSYHSGATEDLDAVIQHILTNKSYDEIYIKGFSLGGNLALKY
LGEKREIPKAVKGAVAVSVPCDLYSSLKQLLLPKNRLYAARFKKHLVEKL
RVKQELFPNEISDKDIASIKTLKDLDDIYTSRAHGFTDAIDYYTKSSCLP
FLPNIKIPTLIINSKNDSFLGPECYPYTEAEENKNLFLETPNFGGHVGFY
GVKNTTYTEKRCLNFLNEL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPLVASTYNPPILFKNGHLSTIYSGIFRKVDGVAQERERITLFDTDFLDL
DWSFASQKSNKVMIILHGLEGSAQRPYIMGSAKVFNQNGYDACAINLRSC
SGAPNLLFRSYHSGATEDLDAVIQHILTNKSYDEIYIKGFSLGGNLALKY
LGEKREIPKAVKGAVAVSVPCDLYSSLKQLLLPKNRLYAARFKKHLVEKL
RVKQELFPNEISDKDIASIKTLKDLDDIYTSRAHGFTDAIDYYTKSSCLP
FLPNIKIPTLIINSKNDSFLGPECYPYTEAEENKNLFLETPNFGGHVGFY
GVKNTTYTEKRCLNFLNEL


Reference
    Title: Complete genome sequence of Cellulophaga algicola type strain (IC166)
    Abt B, Lu M, Misra M, Han C, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng JF and Lapidus A <27 more author(s)>
    Ref: Stand Genomic Sci, 4:72, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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