Gene_Locus Report

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Gene_locus Report for: chipd-c7ptu6

Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQ 2034) Alpha/beta hydrolase fold protein

Comment
only c-term Pfam A Abhydrolase_6 213 417


Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Chitinophaga pinensis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > FCB group: N E > Bacteroidetes/Chlorobi group: N E > Bacteroidetes: N E > Chitinophagia: N E > Chitinophagales: N E > Chitinophagaceae: N E > Chitinophaga: N E > Chitinophaga pinensis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP001699
Sequence
Graphical view for this peptide sequence: chipd-c7ptu6
Colored MSA for 6_AlphaBeta_hydrolase (raw)
SLDYGNNERTGKYATINGNRIYYEEYGEGQPLLLLHGALESIRHYEKQIP
ALAQSFRVIAVDTRGHGKSTADTTRLTYELYADDMYKLLNELKLDSVDVL
GWSDGGITGLILAMCHPEKVKKLAAMGANLYPDTTALYGWLVDTIQHQIK
VIEAEHTPSNAFALRVNRCMLEEPHIDPSTLRTIQCPVLVMAGEHDVIKE
AHTRLIAASIPGAELVIIKNASHYAPIEVPDEFNKQVETFLKKP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

SLDYGNNERTGKYATINGNRIYYEEYGEGQPLLLLHGALESIRHYEKQIP
ALAQSFRVIAVDTRGHGKSTADTTRLTYELYADDMYKLLNELKLDSVDVL
GWSDGGITGLILAMCHPEKVKKLAAMGANLYPDTTALYGWLVDTIQHQIK
VIEAEHTPSNAFALRVNRCMLEEPHIDPSTLRTIQCPVLVMAGEHDVIKE
AHTRLIAASIPGAELVIIKNASHYAPIEVPDEFNKQVETFLKKP



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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