Gene_Locus Report

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Gene_locus Report for: chrsd-q1qup8

Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIM 13768) poly(r)-hydroxyalkanoic acid synthase, class I

Relationship
Family|PHA_synth_I
Block| X
Position in NCBI Life Tree|Chromohalobacter salexigens
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Oceanospirillales: N E > Halomonadaceae: N E > Chromohalobacter: N E > Chromohalobacter salexigens: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AAHZ01000005, CP000285
1 UniProt : Q1QUP8
1 UniProt : Q1QUP8
1 Interpro : Q1QUP8
1 Pfam : Q1QUP8
1 PIRSF : Q1QUP8
1 SUPERFAM : Q1QUP8
Sequence
Graphical view for this peptide sequence: chrsd-q1qup8
Colored MSA for PHA_synth_I (raw)
MWQGPEEGDGAFSDPHAWQRQVTAFNEQYQALMQEAFNRLWPSEAGASVY
ADIQETLRIGADAMIVNAPAVYTVQMRLAQDQWRVWQNALREIMGETVTP
VIEPRPDDRRFRDDAWHSHPFYRFILQHYLLFVRAIEELLVSLDSLPPRV
RHQLEFYARQYVNALAPSNFVSTNPEVVRKTLETRGQNLVEGLRRLREDL
DNSAEGLNVAMTDRSAFRLGDNIAITPGDVVFENDVMQLIQYHPTTDKVF
KTPLLIVPPWINKYYILDLRSDNSMVKWLVEQGHTVFMISWRNPGPEQRH
LTWADYMQSGPIAAMAAIEQACGEKSVNLLSYCIGGTLAATTVAYLTSTR
RGRKVRSVTYMATLLDFSDPGEIGVFLSEPVLAGIERQLARDGYLDGRVM
AFSFNLLRENDLFWSFYISNYLKGETPPAFDLLYWNSDGTNLPAGTHGWY
LRHMYRENRLIEPGGIELDGVRIDLRKVSTPSYFVATRDDHIAKWRTCYL
GARLPKGPRTFVLGGAGHIAGIVNAPTRQKYGYWTRDEMPDDPDAWFEDT
EYREGSWWPHWQAWMTDNRYADPDKTVAARHPGDGELSPIEPAPGRYVRQ
TIPDVLSGTAPEDSDLS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MWQGPEEGDGAFSDPHAWQRQVTAFNEQYQALMQEAFNRLWPSEAGASVY
ADIQETLRIGADAMIVNAPAVYTVQMRLAQDQWRVWQNALREIMGETVTP
VIEPRPDDRRFRDDAWHSHPFYRFILQHYLLFVRAIEELLVSLDSLPPRV
RHQLEFYARQYVNALAPSNFVSTNPEVVRKTLETRGQNLVEGLRRLREDL
DNSAEGLNVAMTDRSAFRLGDNIAITPGDVVFENDVMQLIQYHPTTDKVF
KTPLLIVPPWINKYYILDLRSDNSMVKWLVEQGHTVFMISWRNPGPEQRH
LTWADYMQSGPIAAMAAIEQACGEKSVNLLSYCIGGTLAATTVAYLTSTR
RGRKVRSVTYMATLLDFSDPGEIGVFLSEPVLAGIERQLARDGYLDGRVM
AFSFNLLRENDLFWSFYISNYLKGETPPAFDLLYWNSDGTNLPAGTHGWY
LRHMYRENRLIEPGGIELDGVRIDLRKVSTPSYFVATRDDHIAKWRTCYL
GARLPKGPRTFVLGGAGHIAGIVNAPTRQKYGYWTRDEMPDDPDAWFEDT
EYREGSWWPHWQAWMTDNRYADPDKTVAARHPGDGELSPIEPAPGRYVRQ
TIPDVLSGTAPEDSDLS



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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