(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) > cellular organisms: NE > Bacteria: NE > Proteobacteria: NE > Betaproteobacteria: NE > Neisseriales: NE > Chromobacteriaceae: NE > Chromobacterium group: NE > Chromobacterium: NE > Chromobacterium violaceum: NE
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) Chromobacterium violaceum ATCC 12472: N, E.
Pseudogulbenkiania ferrooxidans EGD-HP2: N, E.
LegendThis sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA MVSTRPAALLVHGLGGTAYDLGALGRTLEDADIVTHSPVLPGHGGSPEDL LGVGWEDWVESIRSEYRALKAKHKVVHLAGVCLGGLVALEVARREKHQDK LALYAPPVFLDGWSLPKLTWLRHAVYHIPRLAKKMRVPEVSPFGIKNARI RKAIQQRFERGDRFHYAYIPLMCIREVDRLRRQLLPRLAEITCPTLIVHA DEDDITSPRSAHHLMQYLGGPVDFMPLSNSYHMVMVDNERAEVLQRSLKF FNSAPQPQLVEQACGWTAFAAA
The whole genome of a pigment-producing isolate from a lake in northern India, Pseudogulbenkiania ferrooxidans strain EGD-HP2, has been sequenced to study the spectrum of biosynthesis of secondary metabolites. The genome annotation data revealed an operon for violacein, which showed homology with the reported operon of a Chromobacterium sp., and also a quinone cofactor.
Title: The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability Ribeiro de Vasconcelos AT, Brazilian National Genome Project Consortium Ref: Proceedings of the National Academy of Sciences of the United States of America, 100:11660, 2003 : PubMed
Chromobacterium violaceum is one of millions of species of free-living microorganisms that populate the soil and water in the extant areas of tropical biodiversity around the world. Its complete genome sequence reveals (i) extensive alternative pathways for energy generation, (ii) approximately 500 ORFs for transport-related proteins, (iii) complex and extensive systems for stress adaptation and motility, and (iv) widespread utilization of quorum sensing for control of inducible systems, all of which underpin the versatility and adaptability of the organism. The genome also contains extensive but incomplete arrays of ORFs coding for proteins associated with mammalian pathogenicity, possibly involved in the occasional but often fatal cases of human C. violaceum infection. There is, in addition, a series of previously unknown but important enzymes and secondary metabolites including paraquat-inducible proteins, drug and heavy-metal-resistance proteins, multiple chitinases, and proteins for the detoxification of xenobiotics that may have biotechnological applications.
