Gene_Locus Report

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Gene_locus Report for: cocsc-i0z139

Coccomyxa subellipsoidea (strain C-169) (Green microalga), Putative uncharacterized protein

Relationship
Family|Duf_1350
Block| X
Position in NCBI Life Tree|Coccomyxa subellipsoidea
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Chlorophyta: N E > Trebouxiophyceae: N E > Trebouxiophyceae incertae sedis: N E > Coccomyxaceae: N E > Coccomyxa: N E > Coccomyxa subellipsoidea: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : XP_005648902
1 UniProt : I0Z139
1 Interpro : I0Z139
1 Pfam : I0Z139
1 PIRSF : I0Z139
1 SUPERFAM : I0Z139
Sequence
Graphical view for this peptide sequence: cocsc-i0z139
Colored MSA for Duf_1350 (raw)
MQRYYLCSVGKVYLSHGHSGAWDNAFSGNDVCICKNLQVAGCWVTGPSAG
RPKATVHFLGGAFAGASPQLIYPLLLQTLAKAGYTVISTPYAVTFKHLDC
ARNVHDRFNGCVEALRGSGQGFLVPEERAVHGVGHSNGALLHALIGAMFA
PANASNALISFNNKQVKDAIPLSLGPIQAAVGDGNVEFIPTPAESRALVQ
SAYRVPYTLLVQFENDAIDETPEMTRILSSANPAGTSSVVLPGTHITPCG
GDVAWQVGRSFSPVDAVALGVKAVVQADIRRLGDKLIGWLESHS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MQRYYLCSVGKVYLSHGHSGAWDNAFSGNDVCICKNLQVAGCWVTGPSAG
RPKATVHFLGGAFAGASPQLIYPLLLQTLAKAGYTVISTPYAVTFKHLDC
ARNVHDRFNGCVEALRGSGQGFLVPEERAVHGVGHSNGALLHALIGAMFA
PANASNALISFNNKQVKDAIPLSLGPIQAAVGDGNVEFIPTPAESRALVQ
SAYRVPYTLLVQFENDAIDETPEMTRILSSANPAGTSSVVLPGTHITPCG
GDVAWQVGRSFSPVDAVALGVKAVVQADIRRLGDKLIGWLESHS



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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