Gene_Locus Report

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Gene_locus Report for: cordk-h2hkn5

Corynebacterium diphtheriae Uncharacterized protein

Comment
only n-term Pfam A Cutinase 67 275 Other strains: Corynebacterium diphtheriae (strain HC03; 241; 31A; HC01; BH8; VA01; INCA 402; ATCC 27012 / C7 (beta) HC02; HC04; CDCE 8392; ATCC 700971 / NCTC 13129 / Biotype gravis)


Relationship
Family|Cutinase
Block| X
Position in NCBI Life Tree|Corynebacterium diphtheriae
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Corynebacteriales: N E > Corynebacteriaceae: N E > Corynebacterium: N E > Corynebacterium diphtheriae: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 9 more: CP003214, CP003207, BX248357
1 UniProt : Q6NHL7
1 UniProt : Q6NHL7
1 Interpro : Q6NHL7
1 Prodom : Q6NHL7
1 Pfam : Q6NHL7
1 PIRSF : Q6NHL7
1 SUPERFAM : Q6NHL7
Sequence
Graphical view for this peptide sequence: cordk-h2hkn5
Colored MSA for Cutinase (raw)
MSRATLGIRSSWVGFVAAATTAMASTIAPVAHAQVAHHVPHDGCSAVEVA
VVGGTTQANIHDDPHDVYSFGKGTNFAVNMTRRFHNVTAWQLPYYSSAGI
TASNNDAEQKEFPPYAVSKNRGVDALDAHLSDQAVKCPDTQFVIAGFSQG
ADIAGDMAERISRGKTNPALTPERVLGVYLLADPGRSDLLMNPTQGQTTT
GKSGPLTENGAVLIETNLGLPGAGSVGIAGPRAAGAFSNLPEKVRSICSS
GDPAC
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSRATLGIRSSWVGFVAAATTAMASTIAPVAHAQVAHHVPHDGCSAVEVA
VVGGTTQANIHDDPHDVYSFGKGTNFAVNMTRRFHNVTAWQLPYYSSAGI
TASNNDAEQKEFPPYAVSKNRGVDALDAHLSDQAVKCPDTQFVIAGFSQG
ADIAGDMAERISRGKTNPALTPERVLGVYLLADPGRSDLLMNPTQGQTTT
GKSGPLTENGAVLIETNLGLPGAGSVGIAGPRAAGAFSNLPEKVRSICSS
GDPAC


References
    Title: Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia
    Trost E, Blom J, Soares Sde C, Huang IH, Al-Dilaimi A, Schroder J, Jaenicke S, Dorella FA, Rocha FS and Tauch A <13 more author(s)>
    Ref: Journal of Bacteriology, 194:3199, 2012 : PubMed

            

    Title: The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129
    Cerdeno-Tarraga AM, Efstratiou A, Dover LG, Holden MT, Pallen M, Bentley SD, Besra GS, Churcher C, James KD and Parkhill J <16 more author(s)>
    Ref: Nucleic Acids Research, 31:6516, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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