Gene_locus Report for: cupnh-q0k2d0 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Prolyl aminopeptidase
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Burkholderiaceae: N E > Cupriavidus: N E > Cupriavidus necator: N E 6_AlphaBeta_hydrolase :
cupnh-q0k0b5 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Putative uncharacterized protein h16_B1777 ,
cupnh-q0k0g2 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Putative extracytoplasmic hydrolase ,
cupnh-q0k0l5 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Hypothetical membrane spanning protein ,
cupnh-q0kab1 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Predicted hydrolase or acyltransferase .
abh_upf0017 :
cupnh-q0ke65 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Predicted hydrolase of the alpha/beta-hydrolase fold .
abh_upf00227 :
cupnn-g0ewh7 Cupriavidus necator (Ralstonia eutropha); Ralstonia sp.; Cupriavidus sp. Esterase .
Carb_B_Bacteria :
cupne-f8gup4 Cupriavidus necator N-1 Para-nitrobenzyl esterase PnbA .
DLH-S :
cupnh-q0k4r4 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Dienelactone hydrolase or related enzyme ,
cupnh-q0ka76 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Putative uncharacterized protein h16_A1995 ,
cupnn-f8gp18 Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia eutropha) Dienelactone hydrolase .
Duf_3141 :
cupnh-q0k0q7 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Putative uncharacterized protein h16_B1632 ,
cupnh-q0kdv2 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Putative uncharacterized protein h16_A0671 .
Epoxide_hydrolase :
cupnh-q0k0b3 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Putative peptidase, S33 family ,
cupnh-q0k9j6 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Predicted hydrolase or acyltransferase ,
cupnh-q0kat1 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Predicted hydrolase or acyltransferase .
Fungal-Bact_LIP :
cupnh-q0kd98 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Secretory lipase .
NFM-deformylase :
cupnn-f8gs82 Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia eutropha). Hydrolase or acyltransferase alpha/beta hydrolase superfamily .
OHBut_olig_hydro_put :
cupnj-hboh Cupriavidus necator (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134)). D-(-)-3-hydroxybutyrate oligomer hydrolase ,
cupnh-hboh Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha). Intracellular 3HB-oligomer hydrolase .
PGAP1 :
cupnh-q0kcu9 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Predicted acetyltransferase and hydrolase with the alpha/beta hydrolase fold .
PolyAspartate-hydrolase :
cupnh-q0k4q3 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)(Ralstonia eutropha) Conserved hypothetical membrane associated protein .
Proline_iminopeptidase :
cupnh-q0jy77 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) Proline iminopeptidase .
T6SS-TLE3 :
cupnh-q0kdw6 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (Ralstonia eutropha). Transmembrane protein Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: cupnh-q0k2d0 Colored MSA for Proline_iminopeptidase (raw)
MNIVVQRRLAAARLPHPFKATSMPDASTISAGFSDAATTFHLRTPDAQRV
HVRLAGAADGEPWLVLHGGPGSGCSAAMAQWFDPRRHRVVMPDQRGAGRS
RPAGCLRRNTVGALLADLEQLRRALGIERWGVVGGSWGAALALAYAAQCP
HAVAALVLRGSFLTGRDDVLALFSPRHGGRRMLHCVKAWGERLPDARARL
LTVSRLLQSGTPVQKRDTAAAWQASEQAWLGLSPASHSRRQRRPERMAAV
NKYRIQAHYLRNRAGLGKPALLSAARVIGAHGLPVTLLHGRADKVCRPAN
ALRLQAAMPGARLAWVDGGHLAAGAMRDALVAAIRAAGWQR
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M N I V V Q R R L A A A R L P H P F K A T S M P D A S T I S A G F S D A A T T F H L R T P D A Q R V H V R L A G A A D G E P W L V L H G G P G S G C S A A M A Q W F D P R R H R V V M P D Q R G A G R S R P A G C L R R N T V G A L L A D L E Q L R R A L G I E R W G V V G G S W G A A L A L A Y A A Q C P H A V A A L V L R G S F L T G R D D V L A L F S P R H G G R R M L H C V K A W G E R L P D A R A R L L T V S R L L Q S G T P V Q K R D T A A A W Q A S E Q A W L G L S P A S H S R R Q R R P E R M A A V N K Y R I Q A H Y L R N R A G L G K P A L L S A A R V I G A H G L P V T L L H G R A D K V C R P A N A L R L Q A A M P G A R L A W V D G G H L A A G A M R D A L V A A I R A A G W Q R
Reference
Title: Genome sequence of the bioplastic-producing Knallgas bacterium Ralstonia eutropha H16Pohlmann A , Fricke WF , Reinecke F , Kusian B , Liesegang H , Cramm R , Eitinger T , Ewering C , Potter M and Bowien B <6 more author(s)> Pohlmann A , Fricke WF , Reinecke F , Kusian B , Liesegang H , Cramm R , Eitinger T , Ewering C , Potter M , Schwartz E , Strittmatter A , Voss I , Gottschalk G , Steinbuchel A , Friedrich B , Bowien B (- 6) Ref: Nat Biotechnol, 24 :1257, 2006 : PubMed Abstract ESTHER: Pohlmann_2006_Nat.Biotechnol_24_1257 PubMedSearch: Pohlmann 2006 Nat.Biotechnol 24 1257 PubMedID: 16964242 Gene_locus related to this paper: alceu-catD1 ,
alceu-catD2 ,
alceu-lipas ,
alceu-q4w8c9 ,
cupne-q7wt49 ,
cupnh-q0jy77 ,
cupnh-q0k0b3 ,
cupnh-q0k0b5 ,
cupnh-q0k0g2 ,
cupnh-q0k0l5 ,
cupnh-q0k0q7 ,
cupnh-q0k2d0 ,
cupnh-q0k4q3 ,
cupnh-q0k4r4 ,
cupnh-q0k9j6 ,
cupnh-q0ka76 ,
cupnh-q0kab1 ,
cupnh-q0kat1 ,
cupnh-q0kcu9 ,
cupnh-q0kd98 ,
cupnh-q0kdv2 ,
cupnh-q0ke65 ,
cuppj-metx ,
cuppj-q472r0 ,
cuptr-b2agb4 ,
cuptr-b3r9z0 ,
cuptr-b3r543 ,
cupnh-acoc ,
cupnh-q0jyv4 ,
cupnh-q0jzs8 ,
cupnh-q0jzu9 ,
cupnh-q0k1a8 ,
cupnh-q0k1c5 ,
cupnh-q0k2b3 ,
cupnh-q0k3m7 ,
cupnh-q0k7y4 ,
cupnh-q0k9g4 ,
cupnh-q0k9l1 ,
cupnh-q0k038 ,
cupnh-q0k189 ,
cupnh-q0k199 ,
cupnh-q0k226 ,
cupnh-q0k320 ,
cupnh-q0k399 ,
cupnh-q0kbr4 ,
cupnh-q0kbs3 ,
cupnh-q0kcd2 ,
cupnh-q0kci6 ,
cupnh-q0kd51 ,
cupnh-q0kfc2 ,
ralpi-u3qr80 ,
cupnn-g0ewh7 ,
cupnh-hboh ,
cupnh-q0kdw6 Abstract
The H(2)-oxidizing lithoautotrophic bacterium Ralstonia eutropha H16 is a metabolically versatile organism capable of subsisting, in the absence of organic growth substrates, on H(2) and CO(2) as its sole sources of energy and carbon. R. eutropha H16 first attracted biotechnological interest nearly 50 years ago with the realization that the organism's ability to produce and store large amounts of poly[R-(-)-3-hydroxybutyrate] and other polyesters could be harnessed to make biodegradable plastics. Here we report the complete genome sequence of the two chromosomes of R. eutropha H16. Together, chromosome 1 (4,052,032 base pairs (bp)) and chromosome 2 (2,912,490 bp) encode 6,116 putative genes. Analysis of the genome sequence offers the genetic basis for exploiting the biotechnological potential of this organism and provides insights into its remarkable metabolic versatility.
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