Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: cuppj-q472r0

Ralstonia eutropha (Cupriavidus necator, Alcaligenes eutrophus) lysophospholipase (EC 3.1.1.5) alpha/beta hydrolase fold:thioesterase

Comment
Other strains: Ralstonia eutropha (strain JMP134) (Cupriavidus necator Alcaligenes eutrophus) (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)


Relationship
Family|Epoxide_hydrolase
Block| X
Position in NCBI Life Tree|Ralstonia eutropha
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Burkholderiaceae: N E > Cupriavidus: N E > Cupriavidus necator: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CP000090, AM260479
2 UniProt : Q472R0, Q0KC19
2 UniProt : Q472R0, Q0KC19
2 Interpro : Q472R0, Q0KC19
2 Pfam : Q472R0, Q0KC19
2 PIRSF : Q472R0, Q0KC19
2 SUPERFAM : Q472R0, Q0KC19
Sequence
Graphical view for this peptide sequence: cuppj-q472r0
Colored MSA for Epoxide_hydrolase (raw)
MELKIAGQPAYAYTGGKPFDPTLPCAVFVHGAQNDHSVWALQTRWFANHG
FSVLAVDLPGHNRSKGAPLATVEEMADWVMSLVAAAGVTAPALVFGHSMG
SLIALECAARHPQAVRGIGLLATAYPMKVSDALLDAALNREDQAIAMVNA
WSHSSLANKPSFPGPGAWMQGGSQRLMERVSRNNPSVHVFHNDFKACNSY
AHGEEAAAALVCPALFITGSKDMMTSPKAAQALAAKMANASMVSVPCGHA
MMGERPDEVLDALAAFARKVVAAR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MELKIAGQPAYAYTGGKPFDPTLPCAVFVHGAQNDHSVWALQTRWFANHG
FSVLAVDLPGHNRSKGAPLATVEEMADWVMSLVAAAGVTAPALVFGHSMG
SLIALECAARHPQAVRGIGLLATAYPMKVSDALLDAALNREDQAIAMVNA
WSHSSLANKPSFPGPGAWMQGGSQRLMERVSRNNPSVHVFHNDFKACNSY
AHGEEAAAALVCPALFITGSKDMMTSPKAAQALAAKMANASMVSVPCGHA
MMGERPDEVLDALAAFARKVVAAR


Reference
    Title: Genome sequence of the bioplastic-producing Knallgas bacterium Ralstonia eutropha H16
    Pohlmann A, Fricke WF, Reinecke F, Kusian B, Liesegang H, Cramm R, Eitinger T, Ewering C, Potter M and Bowien B <6 more author(s)>
    Ref: Nat Biotechnol, 24:1257, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer