Gene_Locus Report

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Gene_locus Report for: decar-q47hd2

Dechloromonas aromatica (strain RCB) terminal

Relationship
Family|PhaC_cen_dom
Block| X
Position in NCBI Life Tree|Dechloromonas aromatica
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Rhodocyclales: N E > Azonexaceae: N E > Dechloromonas: N E > Dechloromonas aromatica: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP000089
1 UniProt : Q47HD2
1 UniProt : Q47HD2
1 Interpro : Q47HD2
1 Pfam : Q47HD2
1 PIRSF : Q47HD2
1 SUPERFAM : Q47HD2
Sequence
Graphical view for this peptide sequence: decar-q47hd2
Colored MSA for PhaC_cen_dom (raw)
MSSNSTEKHNGVNIHSLSPVESLGKALGNAVDPYGVTTSMLAAQMAWLMH
PQELARAMSALSGDLVELQTHVMHRAMGLPSADVIRPNADDARFADPIWT
ESATWDIVKEWYIAFTHRLEDMFFETPGLSDKERRRSAFWLRNWLNMVAP
TNFFLLNPVAMRRFVETNGESLKQGWENFQRDVKAKNILMVEPDAFKVGE
DLATTPGKVIFRNRLVELIHYAPTTAKVRAMPIVIITPWINKFYILDLTA
KKSMVKYLTDQGFSVFITSWKNPGEELSDVRFDDYLLEGVNEVVSVASEF
CKVPKVHLVGYCIGGTLVSTYMAWANKRFGQDKVPVAHWTLFTTLTDFAH
PGDIDVFIDEACIGALEESMAKKGYLDGSEMASSFRMLRSNPLIWHYWTQ
SYLLGEPLAPFDVLFWNMDTTRMPQAMHSYYLRELYLENNLIKRDKLNIA
GEAIDLDLIEQPLYAVTAEDDHIAPWKQCYRIRKQINVKAPVRFVLSTSG
HILGIVNPPVNPPKRAYWIGEPERNEHWEHWFDRAEKKPGTWWEDWTRWL
GERTGDLVDAHPAANRKFPALADAPGTYVLEK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSSNSTEKHNGVNIHSLSPVESLGKALGNAVDPYGVTTSMLAAQMAWLMH
PQELARAMSALSGDLVELQTHVMHRAMGLPSADVIRPNADDARFADPIWT
ESATWDIVKEWYIAFTHRLEDMFFETPGLSDKERRRSAFWLRNWLNMVAP
TNFFLLNPVAMRRFVETNGESLKQGWENFQRDVKAKNILMVEPDAFKVGE
DLATTPGKVIFRNRLVELIHYAPTTAKVRAMPIVIITPWINKFYILDLTA
KKSMVKYLTDQGFSVFITSWKNPGEELSDVRFDDYLLEGVNEVVSVASEF
CKVPKVHLVGYCIGGTLVSTYMAWANKRFGQDKVPVAHWTLFTTLTDFAH
PGDIDVFIDEACIGALEESMAKKGYLDGSEMASSFRMLRSNPLIWHYWTQ
SYLLGEPLAPFDVLFWNMDTTRMPQAMHSYYLRELYLENNLIKRDKLNIA
GEAIDLDLIEQPLYAVTAEDDHIAPWKQCYRIRKQINVKAPVRFVLSTSG
HILGIVNPPVNPPKRAYWIGEPERNEHWEHWFDRAEKKPGTWWEDWTRWL
GERTGDLVDAHPAANRKFPALADAPGTYVLEK



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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