Gene_Locus Report
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Gene_locus Report for: diaca-Q9ZTW1

Dianthus caryophyllus (Carnation) (Clove pink) lipase (fragment)

Relationship
Family|Plant_phospholipase
Block| L
Position in NCBI Life Tree|Dianthus caryophyllus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > Caryophyllales: N E > Caryophyllaceae: N E > Caryophylleae: N E > Dianthus: N E > Dianthus caryophyllus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AF026480
1 UniProt : Q9ZTW1
1 Interpro : Q9ZTW1
1 Pfam : Q9ZTW1
1 PIRSF : Q9ZTW1
1 SUPERFAM : Q9ZTW1
Sequence
Peptide
Graphical view for this peptide sequence: diaca-Q9ZTW1
Colored MSA for Plant_phospholipase (raw) 
MAAEAQPLGLSKPGPTWPELLGSNAWAGLLNPLNDELRELLLRCGDFCQV
TYDTFINDQNSSYCGSSRYGKADLLHKTAFPGGADRFDVVAYLYATAKVS
VPEAFLLKSRSREKWDRESNWIGYVVVSNDETSRVAGRREVYVVWRGTCR
DYEWVDVLGAQLESAHPLLRTQQTTHVEKVENEEKKSIHKSSWYDCFNIN
LLGSASKDKGKGSDDDDDDDPKVMQGWMTIYTSEDPKSPFTKLSARTQLQ
TKLKQLMTKYKDETLSITFAGHSLGATLSVVSAFDIVENLTTEIPVTAVV
FGCPKVGNKKFQQLFDSYPNLNVLHVRNVIDLIPLYPVKLMGYVNIGIEL
EIDSRKSTFLKDSKNPSDWHNLQAILHVVSGWHGVKGEFKVVNKRSVALV
NKSCDFLKEECLVPPAWWVVQNKGMVLNKDGEWVLAPPEEDPTPEFD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MAAEAQPLGLSKPGPTWPELLGSNAWAGLLNPLNDELRELLLRCGDFCQV
TYDTFINDQNSSYCGSSRYGKADLLHKTAFPGGADRFDVVAYLYATAKVS
VPEAFLLKSRSREKWDRESNWIGYVVVSNDETSRVAGRREVYVVWRGTCR
DYEWVDVLGAQLESAHPLLRTQQTTHVEKVENEEKKSIHKSSWYDCFNIN
LLGSASKDKGKGSDDDDDDDPKVMQGWMTIYTSEDPKSPFTKLSARTQLQ
TKLKQLMTKYKDETLSITFAGHSLGATLSVVSAFDIVENLTTEIPVTAVV
FGCPKVGNKKFQQLFDSYPNLNVLHVRNVIDLIPLYPVKLMGYVNIGIEL
EIDSRKSTFLKDSKNPSDWHNLQAILHVVSGWHGVKGEFKVVNKRSVALV
NKSCDFLKEECLVPPAWWVVQNKGMVLNKDGEWVLAPPEEDPTPEFD

Reference
    Title: An ethylene-induced cDNA encoding a lipase expressed at the onset of senescence.
    Hong Y, Wang TW, Hudak KA, Schade F, Froese CD, Thompson JE
    Ref: Proceedings of the National Academy of Sciences of the United States of America, 97:8717, 2000 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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