Gene_Locus Report

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Gene_locus Report for: dicd5-d2bwi2

Dickeya dadantii; Dickeya zeae, Dienelactone hydrolase

Comment
Other strains: Dickeya dadantii (strain Ech586); Dickeya zeae


Relationship
Family|Abhydrolase_7
Block| X
Position in NCBI Life Tree|Dickeya dadantii
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Pectobacteriaceae: N E > Dickeya: N E > Dickeya dadantii: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CP001836, WP_029456219
1 UniProt : D2BWI2
2 UniProt : D2BWI2, A0A0A8FGU7
2 Interpro : D2BWI2, A0A0A8FGU7
2 Pfam : D2BWI2, A0A0A8FGU7
2 PIRSF : D2BWI2, A0A0A8FGU7
2 SUPERFAM : D2BWI2, A0A0A8FGU7
Sequence
Graphical view for this peptide sequence: dicd5-d2bwi2
Colored MSA for Abhydrolase_7 (raw)
MKIGRLRRTLGILMCCLASAPLMANDHSYTTTSVTDDALPTFYPQLKQQL
TYPDSWLAGHDVHFNQWREHARQLVRSLLLTPDSHRAFEPQVVDRQDRDT
YVAEKVAFNLTDESRVAGLLLTPKTPGPHPAVLLLHDHGAKFDIGKEKMI
RPWGDDARIASAKAWADRYFTGRFVGDELAKRGYVVLAVDALGWGDRGPL
KYEQQQALASNFFNLGRSLAGDMAYEDTRSLDFLASLRSVDPKCVGVVGF
SMGAYRAWQLAALSDKAAATAAVAWMGTYDGLMVPGNNVLRGQSSFYMLH
PGLPAHLDFPDVASIAAPRPMLFFNGGKDNLFPQQAVQAAYERMHQVWQS
QHADDRLETRIWPELGHVFYQEQQEAVFQWLDRWLASAPR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKIGRLRRTLGILMCCLASAPLMANDHSYTTTSVTDDALPTFYPQLKQQL
TYPDSWLAGHDVHFNQWREHARQLVRSLLLTPDSHRAFEPQVVDRQDRDT
YVAEKVAFNLTDESRVAGLLLTPKTPGPHPAVLLLHDHGAKFDIGKEKMI
RPWGDDARIASAKAWADRYFTGRFVGDELAKRGYVVLAVDALGWGDRGPL
KYEQQQALASNFFNLGRSLAGDMAYEDTRSLDFLASLRSVDPKCVGVVGF
SMGAYRAWQLAALSDKAAATAAVAWMGTYDGLMVPGNNVLRGQSSFYMLH
PGLPAHLDFPDVASIAAPRPMLFFNGGKDNLFPQQAVQAAYERMHQVWQS
QHADDRLETRIWPELGHVFYQEQQEAVFQWLDRWLASAPR



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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