Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: droer-b3nz06

Drosophila erecta (Fruit fly) GG23789

Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Drosophila erecta
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Brachycera: N E > Muscomorpha: N E > Eremoneura: N E > Cyclorrhapha: N E > Schizophora: N E > Acalyptratae: N E > Ephydroidea: N E > Drosophilidae: N E > Drosophilinae: N E > Drosophilini: N E > Drosophila [fruit fly, genus]: N E > Sophophora: N E > melanogaster group: N E > melanogaster subgroup: N E > Drosophila erecta: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CH954181
1 UniProt : B3NZ06
1 UniProt : B3NZ06
1 Interpro : B3NZ06
1 Pfam : B3NZ06
1 PIRSF : B3NZ06
1 SUPERFAM : B3NZ06
Sequence
Graphical view for this peptide sequence: droer-b3nz06
Colored MSA for Neuroligin (raw)
MKSNQLAARLVLPAHQQLNNSSLRSHNLELHCARMGESQLLLLLRLLLLP
TVLFGWMDSAGASTADIYKGARLGHRIVQTRYGRLHGLILPLDSFRFLRS
VEVFLGVPYATPPTKQNRFSPTRAPAPWDGIRISDKYSPVCPQRLPNIQN
ETAALEKMPKGRLEYLKRLLPFLENQSEDCLYLNVFSPVNAGANEKKLPV
IVFIHGESFEWSSGNPYDGSVLASYGEVVVVTLNYRLGILGFLNANPNPH
AHARVANYGLMDQMAALHWIQQNIQKFGGDPNSVTLAGHGTGAACINYLM
TSPTMVRGLFHRAILMSGSAYSSWALVEDPVLFAIKLAKEVNCTIPDDIN
RHHEQIVDCLRDVPLEDLYMADIQAPNFLTSFGPSVDGVVIRPGHSNLDI
DDLMARNSRRSSADSGFQSSAGGGGGQGGGAGGGGGGGSGSAFGGGYFGG
GGAGAMNMGGHYDVLFGVVTGESIWRFSAHDIQNGFEGERRDKIIRTYVR
NAYNYHLNEIFYTIVNEYTDWDRTSQHPINTRDTAVAALSDAQFVAPIVR
AGDILAANSPPPPSGRCYFYVFDYQTKDGDYPQRMGTVHGEDLPYIFGAP
LVDGFSHFPQNYTKSETALSEAVMIFWTNFARTGNPNEHHRQDSSLPVSK
ERNRFRSITWENYDPLHQKYLEIGMKPRIKNHFRAHQLSIWLRLIPELHR
AGMEDVIARHNLFRNHDDMDLYEGPVKPDPFGISTAAGATGSSSSSSSSS
RLLLVDEQLMMKKGRGLNASAYLNGILGGK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKSNQLAARLVLPAHQQLNNSSLRSHNLELHCARMGESQLLLLLRLLLLP
TVLFGWMDSAGASTADIYKGARLGHRIVQTRYGRLHGLILPLDSFRFLRS
VEVFLGVPYATPPTKQNRFSPTRAPAPWDGIRISDKYSPVCPQRLPNIQN
ETAALEKMPKGRLEYLKRLLPFLENQSEDCLYLNVFSPVNAGANEKKLPV
IVFIHGESFEWSSGNPYDGSVLASYGEVVVVTLNYRLGILGFLNANPNPH
AHARVANYGLMDQMAALHWIQQNIQKFGGDPNSVTLAGHGTGAACINYLM
TSPTMVRGLFHRAILMSGSAYSSWALVEDPVLFAIKLAKEVNCTIPDDIN
RHHEQIVDCLRDVPLEDLYMADIQAPNFLTSFGPSVDGVVIRPGHSNLDI
DDLMARNSRRSSADSGFQSSAGGGGGQGGGAGGGGGGGSGSAFGGGYFGG
GGAGAMNMGGHYDVLFGVVTGESIWRFSAHDIQNGFEGERRDKIIRTYVR
NAYNYHLNEIFYTIVNEYTDWDRTSQHPINTRDTAVAALSDAQFVAPIVR
AGDILAANSPPPPSGRCYFYVFDYQTKDGDYPQRMGTVHGEDLPYIFGAP
LVDGFSHFPQNYTKSETALSEAVMIFWTNFARTGNPNEHHRQDSSLPVSK
ERNRFRSITWENYDPLHQKYLEIGMKPRIKNHFRAHQLSIWLRLIPELHR
AGMEDVIARHNLFRNHDDMDLYEGPVKPDPFGISTAAGATGSSSSSSSSS
RLLLVDEQLMMKKGRGLNASAYLNGILGGK


References
    Title: Assembly reconciliation
    Zimin AV, Smith DR, Sutton G, Yorke JA
    Ref: Bioinformatics, 24:42, 2008 : PubMed

            

    Title: Evolution of genes and genomes on the Drosophila phylogeny
    Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W and MacCallum I <405 more author(s)>
    Ref: Nature, 450:203, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer