Gene_Locus Report

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Gene_locus Report for: drogr-b4jf76

Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi) GH18315

Comment
only central part Pfam A COesterase 175 710


Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Drosophila grimshawi
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Brachycera: N E > Muscomorpha: N E > Eremoneura: N E > Cyclorrhapha: N E > Schizophora: N E > Acalyptratae: N E > Ephydroidea: N E > Drosophilidae: N E > Drosophilinae: N E > Drosophilini: N E > Drosophila [fruit fly, genus]: N E > Hawaiian Drosophila: N E > picture wing clade: N E > grimshawi clade: N E > grimshawi group: N E > grimshawi subgroup: N E > Drosophila grimshawi: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CH916369
1 UniProt : B4JF76
1 UniProt : B4JF76
1 Interpro : B4JF76
1 Pfam : B4JF76
1 PIRSF : B4JF76
1 SUPERFAM : B4JF76
Sequence
Graphical view for this peptide sequence: drogr-b4jf76
Colored MSA for Neuroligin (raw)
PERRHVVPDKLQYTKELQIKQGRLMGITRRFQVTSGLRDVDQYLGLPYAE
APIGSRRFMPPGAPLPWQGLKIARHLPPVCPQKLPDMSGQNSKSISRARY
KHLLRLMPYLKTESEDCLYLNLYVPHEEPLTTSKPHAVLVYLHGESFEWN
SGNAYDGSVLASYGEVIVVTVNYRLGVLGFMRPGINAHNIANYALLDQIA
ALHWIKENIGSFGGDNTRVTLMGHSTGAACVNYLMVSPVASGLFHRAILM
SGSAMSDWAASNQSLQLTMQIAQALGCPLSDHKDEDALLDCLRQHRYQDI
LHIPTSLQPFSTSLGPIVDGHVIPNQPYKVMGHYTEHFSRYDLLFGITES
ESYHTLAALALEEGLRENERDNLLHFYMQSRFDVRPDLALAATLKKYQDM
YNNPIKATNLEHCDVVLDILSDASVVGPLLQTGMFHADVNRRNYMYVFGH
NSAMGPYANLPHSIMGEELPFVFGAPLAPVGPYPSHNYSVQEKLLSEAVM
AYWTNFVKTGNPKAPWKGTFLNSHLLEWDRYDLDWPEFNKRAQAYLNIGI
PPTVGYKYRQIYMNFWNKELPDELNQIAAIQQKGQQQQQQQQQQFPGNGV
ITGHMSKYGARDKGAEDPVRTLKLLLQKPLPSKGSEQAETAAENMYNAPP
TFGHVHRQQQQQQPAVEGVAISGEDPTQTSQHVSDYGEYGATVAPTEPIA
KSETTLQFLIALIAIFIVLNVVIYATFLFRQRRKQNTSL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

PERRHVVPDKLQYTKELQIKQGRLMGITRRFQVTSGLRDVDQYLGLPYAE
APIGSRRFMPPGAPLPWQGLKIARHLPPVCPQKLPDMSGQNSKSISRARY
KHLLRLMPYLKTESEDCLYLNLYVPHEEPLTTSKPHAVLVYLHGESFEWN
SGNAYDGSVLASYGEVIVVTVNYRLGVLGFMRPGINAHNIANYALLDQIA
ALHWIKENIGSFGGDNTRVTLMGHSTGAACVNYLMVSPVASGLFHRAILM
SGSAMSDWAASNQSLQLTMQIAQALGCPLSDHKDEDALLDCLRQHRYQDI
LHIPTSLQPFSTSLGPIVDGHVIPNQPYKVMGHYTEHFSRYDLLFGITES
ESYHTLAALALEEGLRENERDNLLHFYMQSRFDVRPDLALAATLKKYQDM
YNNPIKATNLEHCDVVLDILSDASVVGPLLQTGMFHADVNRRNYMYVFGH
NSAMGPYANLPHSIMGEELPFVFGAPLAPVGPYPSHNYSVQEKLLSEAVM
AYWTNFVKTGNPKAPWKGTFLNSHLLEWDRYDLDWPEFNKRAQAYLNIGI
PPTVGYKYRQIYMNFWNKELPDELNQIAAIQQKGQQQQQQQQQQFPGNGV
ITGHMSKYGARDKGAEDPVRTLKLLLQKPLPSKGSEQAETAAENMYNAPP
TFGHVHRQQQQQQPAVEGVAISGEDPTQTSQHVSDYGEYGATVAPTEPIA
KSETTLQFLIALIAIFIVLNVVIYATFLFRQRRKQNTSL


References
    Title: Assembly reconciliation
    Zimin AV, Smith DR, Sutton G, Yorke JA
    Ref: Bioinformatics, 24:42, 2008 : PubMed

            

    Title: Evolution of genes and genomes on the Drosophila phylogeny
    Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W and MacCallum I <405 more author(s)>
    Ref: Nature, 450:203, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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