drome-2vite

 
Drosophila melanogaster (Fruit fly) Vitellogenin II precursor (yolk protein). YP2

Comment
Nucleotide sequence (not peptideseq) from Celera differs from the published sequence Many drosophila yolk 2 proteins are presented as Other_strains see tree display


Relationship
Block L
Drosophila melanogaster position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Brachycera: N E > Muscomorpha: N E > Eremoneura: N E > Cyclorrhapha: N E > Schizophora: N E > Acalyptratae: N E > Ephydroidea: N E > Drosophilidae: N E > Drosophilinae: N E > Drosophilini: N E > Drosophila [fruit fly, genus]: N E > Sophophora: N E > melanogaster group: N E > melanogaster subgroup: N E > Drosophila melanogaster: N E

Molecular evidence
Database
No mutation
No structure
No kinetic



3 Genbank : J01157, AE003449, X01524
1 UniProt : P02844
1 Ncbi-pid : 7291112
1 UniProtTrembl : P02844
1 Interpro : P02844
1 Prodom : P02844
1 Pfam : P02844
1 PIRSF : P02844
1 SUPERFAM : P02844
1 QuickSwissBlast : P02844
1 FlyBase : 0005391
 
Sequence
Graphical view for this peptide sequence: drome-2vite
Colored MSA for Yolk-Protein_dipter (raw)
MNPLRTLCVMACLLAVAMGNPQSGNRSGRRSNSLDNVEQPSNWVNPREVE
ELPNLKEVTLKKLQEMSMEEGATLLDKLYHLSQFNHVFKPDYTPEPSQIR
GYIVGERGQKIEFNLNTLVEKVKRQQKFGDDEVTIFIQGLPETNTQVQKA
TRKLVQAYQQRYNLQPYETTDYSNEEQSQRSSSEEQQTQRRKQNGEQDDT
KTGDLIVIQLGNAIEDFEQYATLNIERLGEIIGNRLVELTNTVNVPQEII
HLIGSGPAAHVAGVAGRQFTRQTGHKLRRITALDPTKIYGKPEERLTGLA
RGDADFVDAIHTSAYGMGTSQRLANVDFFPNGPSTGVPGADNVVEATMRA
TRYFAESVRPGNERNFPSVAASSYQEYKQNKGYGKRGYMGIATDFDLQGD
YILQVNSKSPFGRSTPAQKQTGYHQVHQPWRQSSSNQGSRRQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNPLRTLCVMACLLAVAMGNPQSGNRSGRRSNSLDNVEQPSNWVNPREVE
ELPNLKEVTLKKLQEMSMEEGATLLDKLYHLSQFNHVFKPDYTPEPSQIR
GYIVGERGQKIEFNLNTLVEKVKRQQKFGDDEVTIFIQGLPETNTQVQKA
TRKLVQAYQQRYNLQPYETTDYSNEEQSQRSSSEEQQTQRRKQNGEQDDT
KTGDLIVIQLGNAIEDFEQYATLNIERLGEIIGNRLVELTNTVNVPQEII
HLIGSGPAAHVAGVAGRQFTRQTGHKLRRITALDPTKIYGKPEERLTGLA
RGDADFVDAIHTSAYGMGTSQRLANVDFFPNGPSTGVPGADNVVEATMRA
TRYFAESVRPGNERNFPSVAASSYQEYKQNKGYGKRGYMGIATDFDLQGD
YILQVNSKSPFGRSTPAQKQTGYHQVHQPWRQSSSNQGSRRQ

no DNA




References
1 more
    Title: The genome sequence of Drosophila melanogaster
    Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA and Venter JC <185 more author(s)>
    Ref: Science, 287:2185, 2000 : PubMed

            

    Title: Purification of yolk protein 2 of Drosophila melanogaster and identification of its site of tyrosine sulfation
    Baeuerle PA, Lottspeich F, Huttner WB
    Ref: Journal of Biological Chemistry, 263:14925, 1988 : PubMed

            

    Title: Vitellogenin in Drosophila melanogaster: a comparison of the YPI and YPII genes and their transcription products
    Hovemann B, Galler R
    Ref: Nucleic Acids Research, 10:2261, 1982 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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