Gene_Locus Report

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Gene_locus Report for: dromo-b4kjx0

Drosophila mojavensis (Fruit fly) GI24029

Comment
only n-term Pfam A COesterase 123 912


Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Drosophila mojavensis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Brachycera: N E > Muscomorpha: N E > Eremoneura: N E > Cyclorrhapha: N E > Schizophora: N E > Acalyptratae: N E > Ephydroidea: N E > Drosophilidae: N E > Drosophilinae: N E > Drosophilini: N E > Drosophila [fruit fly, genus]: N E > Drosophila [fruit fly, subgenus]: N E > repleta group: N E > mulleri subgroup: N E > mojavensis species complex: N E > Drosophila mojavensis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CH933807, XP_015021015.1
1 UniProt : B4KJX0
2 UniProt : B4KJX0, A0A0Q9X5E9
2 Interpro : B4KJX0, A0A0Q9X5E9
2 Pfam : B4KJX0, A0A0Q9X5E9
2 PIRSF : B4KJX0, A0A0Q9X5E9
2 SUPERFAM : B4KJX0, A0A0Q9X5E9
Sequence
Graphical view for this peptide sequence: dromo-b4kjx0
Colored MSA for Neuroligin (raw)
MPPITPSTWKTVRNADRFSPVCPQNVPIPPNGPEALLELPRARLAQLRRL
LPLLKNQSEDCLYLNIYVPYETQRARHNEAANDSASTSASSSSKSSTSST
SNSLLSTVLFIHGESYDWNSGNPYDGSELAAHGNVIVVTINFRLGIFGFL
KTGGKESAQGNFGLMDLVAGLHWLKENLPAFGGNPQSITLLGYGTGAVLA
NILAVSPVASDLIQRAVLISGTALSPWAIQKNPLFVKRRVAEQTGCHGDM
LYDDLAPCLRTKSVAELLSVKIDHPRFLVGFAPFVDGTVITPKTDAMSST
ALPLGSAIVSTSGIEYANFPKRDLMFCLTSVESYLDLSAQDLEFGFNETR
RDRILRTFVRNNFHYHLNEIFAVLKNEYTDWEKAIRNPLSARDATLQFLS
DGHTASPLIKLGYMHSLRGGRTYFVHFKHRTVEDEYPQRTGSVHGEDVPF
WLGLPVSPLFPHNYTAQEHQIGRLMLRYLANFAKTGNPNHSTTGQALPTA
SQSRAALHPQRKRSAPRYQDALATGEALNLAVLYNQRRSNAMHEKRAFVR
RRLRSNDANAPQQSLSTELELGNYDGDELPFWDAYDVVNQLYIELGNKAN
IQSHYRGHKLSMWLNLIPQLHRHFNINDQSMRHHQFQDDLNSRDLYEGVV
RPQLQTKPAEDDNIIIVQTARTTAAPPPTTSKQEMMNATNALGAAGATAT
TECGIDGAMSVSELTTTTQAPKDNRTHGQVETHKDLATASTGIIGNLELL
RRLSGKQFQSYTTALIATVAVGCFLLILNVLIFAGIYHQR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPPITPSTWKTVRNADRFSPVCPQNVPIPPNGPEALLELPRARLAQLRRL
LPLLKNQSEDCLYLNIYVPYETQRARHNEAANDSASTSASSSSKSSTSST
SNSLLSTVLFIHGESYDWNSGNPYDGSELAAHGNVIVVTINFRLGIFGFL
KTGGKESAQGNFGLMDLVAGLHWLKENLPAFGGNPQSITLLGYGTGAVLA
NILAVSPVASDLIQRAVLISGTALSPWAIQKNPLFVKRRVAEQTGCHGDM
LYDDLAPCLRTKSVAELLSVKIDHPRFLVGFAPFVDGTVITPKTDAMSST
ALPLGSAIVSTSGIEYANFPKRDLMFCLTSVESYLDLSAQDLEFGFNETR
RDRILRTFVRNNFHYHLNEIFAVLKNEYTDWEKAIRNPLSARDATLQFLS
DGHTASPLIKLGYMHSLRGGRTYFVHFKHRTVEDEYPQRTGSVHGEDVPF
WLGLPVSPLFPHNYTAQEHQIGRLMLRYLANFAKTGNPNHSTTGQALPTA
SQSRAALHPQRKRSAPRYQDALATGEALNLAVLYNQRRSNAMHEKRAFVR
RRLRSNDANAPQQSLSTELELGNYDGDELPFWDAYDVVNQLYIELGNKAN
IQSHYRGHKLSMWLNLIPQLHRHFNINDQSMRHHQFQDDLNSRDLYEGVV
RPQLQTKPAEDDNIIIVQTARTTAAPPPTTSKQEMMNATNALGAAGATAT
TECGIDGAMSVSELTTTTQAPKDNRTHGQVETHKDLATASTGIIGNLELL
RRLSGKQFQSYTTALIATVAVGCFLLILNVLIFAGIYHQR


References
    Title: Assembly reconciliation
    Zimin AV, Smith DR, Sutton G, Yorke JA
    Ref: Bioinformatics, 24:42, 2008 : PubMed

            

    Title: Evolution of genes and genomes on the Drosophila phylogeny
    Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W and MacCallum I <405 more author(s)>
    Ref: Nature, 450:203, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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