Gene_Locus Report

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Gene_locus Report for: drops-q294n6

Drosophila pseudoobscura (Fruit fly) ga11698-pa

Relationship
Family|Carb_B_Arthropoda
Block| C
Position in NCBI Life Tree|Drosophila pseudoobscura
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Brachycera: N E > Muscomorpha: N E > Eremoneura: N E > Cyclorrhapha: N E > Schizophora: N E > Acalyptratae: N E > Ephydroidea: N E > Drosophilidae: N E > Drosophilinae: N E > Drosophilini: N E > Drosophila [fruit fly, genus]: N E > Sophophora: N E > obscura group: N E > pseudoobscura subgroup: N E > Drosophila pseudoobscura: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : XP_001359775
1 UniProt : A0A6I8URT6
1 Interpro : A0A6I8URT6
1 Pfam : A0A6I8URT6
1 PIRSF : A0A6I8URT6
1 SUPERFAM : A0A6I8URT6
Sequence
Graphical view for this peptide sequence: drops-q294n6
Colored MSA for Carb_B_Arthropoda (raw)
DSIQVQTQSGPVVGRRCTGVYGDEYVSFEGIPYAQPPVGRLRFMAPLPVI
PWTEPLDCREKGPKPLQFNHYSKQLEGVEDSLHLNVYAKELHSANPLPMI
VFFFGGGFEKGDPTTDLHSPDYFMMRDVVVVTISYRVGPLGFLSLNDPAV
GVPGNAGLKDQLLGLQWITANAARFNADPNNVTAFGESAGAASVHYLMLN
PKADGLFQKAILQSGNVLCTWAQFPITDMPQRLAENLGMENAHAATDAMI
LDYLQAMPGEKLVKPYLLSQAEHMDDCVFQFGPMVEPYKTDHCVLPKQPA
ELLATAWGNKIPLLMGGTSFEGLLMYARVFVAPYLLTSLKDQPEHMLPLD
VKRALPQALARSLGQRLQATHFGENALAMSPEGVLAYCEYASYKVFWLPI
VRLLRSRLRHSTAPTYLYRFDFDSPTFNHQRIKYVGDKLRGVAHVDDHSY
LWFGNFAWKLDKHTPEFLTIERMIDIFTSFARSSNPNCPKVAEQLPRTKQ
WMPLDNRQLTVECLNISESIKLIELPELQKVRVWENVCK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

DSIQVQTQSGPVVGRRCTGVYGDEYVSFEGIPYAQPPVGRLRFMAPLPVI
PWTEPLDCREKGPKPLQFNHYSKQLEGVEDSLHLNVYAKELHSANPLPMI
VFFFGGGFEKGDPTTDLHSPDYFMMRDVVVVTISYRVGPLGFLSLNDPAV
GVPGNAGLKDQLLGLQWITANAARFNADPNNVTAFGESAGAASVHYLMLN
PKADGLFQKAILQSGNVLCTWAQFPITDMPQRLAENLGMENAHAATDAMI
LDYLQAMPGEKLVKPYLLSQAEHMDDCVFQFGPMVEPYKTDHCVLPKQPA
ELLATAWGNKIPLLMGGTSFEGLLMYARVFVAPYLLTSLKDQPEHMLPLD
VKRALPQALARSLGQRLQATHFGENALAMSPEGVLAYCEYASYKVFWLPI
VRLLRSRLRHSTAPTYLYRFDFDSPTFNHQRIKYVGDKLRGVAHVDDHSY
LWFGNFAWKLDKHTPEFLTIERMIDIFTSFARSSNPNCPKVAEQLPRTKQ
WMPLDNRQLTVECLNISESIKLIELPELQKVRVWENVCK


References
    Title: Evolution of genes and genomes on the Drosophila phylogeny
    Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W and MacCallum I <405 more author(s)>
    Ref: Nature, 450:203, 2007 : PubMed

            

    Title: Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution
    Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R and Gibbs RA <42 more author(s)>
    Ref: Genome Res, 15:1, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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