Gene_Locus Report

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Gene_locus Report for: gibze-i1rkc4

Gibberella zeae (Wheat head blight fungus) (Fusarium graminearum); Fusarium culmorum; Fusarium pseudograminearum; Fusarium sporotrichioides. Histone deacetylase; Fusarium langsethiae. Uncharacterized protein

Comment
Other strains: Gibberella zeae (Wheat head blight fungus) (Fusarium graminearum) (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084); Fusarium culmorum; Fusarium pseudograminearum (CS3487; CS3096; CS3427) (Wheat and barley crown-rot fungus); Fusarium sporotrichioides; Fusarium langsethiae


Relationship
Family|Arb2_domain
Block| X
Position in NCBI Life Tree|Gibberella zeae
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Pezizomycotina: N E > leotiomyceta: N E > sordariomyceta: N E > Sordariomycetes: N E > Hypocreomycetidae: N E > Hypocreales: N E > Nectriaceae: N E > Fusarium: N E > Fusarium sambucinum species complex: N E > Fusarium graminearum: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: gibze-i1rkc4
Colored MSA for Arb2_domain (raw)
RLHDVIRNAQRQVLQTKHNMIPLYIQRENLYKSYENQVLVTPGLHEAKKI
LIIIHDPPQLLAQPDVIDSTLDPHNAWVVDGVTDYIDWAIDQKFGVMDIN
IPAYVTHDEDSDAHIPSFKEQALTEQIQTLVCYLWDNHLQLYDADDIFIM
GVGNAYLGVKVLLINRDCKSRITGVVNFANGTLRPIKSDIDTDLSSWYKE
NSRVFIAGDHACWADASLTKKVNKRRFGSVVRSPMFGLNKMMAHHAKEAR
EWILERLEGGSDADMTTEEK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

RLHDVIRNAQRQVLQTKHNMIPLYIQRENLYKSYENQVLVTPGLHEAKKI
LIIIHDPPQLLAQPDVIDSTLDPHNAWVVDGVTDYIDWAIDQKFGVMDIN
IPAYVTHDEDSDAHIPSFKEQALTEQIQTLVCYLWDNHLQLYDADDIFIM
GVGNAYLGVKVLLINRDCKSRITGVVNFANGTLRPIKSDIDTDLSSWYKE
NSRVFIAGDHACWADASLTKKVNKRRFGSVVRSPMFGLNKMMAHHAKEAR
EWILERLEGGSDADMTTEEK


References
2 more
    Title: The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum
    King R, Urban M, Hammond-Kosack MC, Hassani-Pak K, Hammond-Kosack KE
    Ref: BMC Genomics, 16:544, 2015 : PubMed

            

    Title: Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
    Ma LJ, van der Does HC, Borkovich KA, Coleman JJ, Daboussi MJ, Di Pietro A, Dufresne M, Freitag M, Grabherr M and Rep M <53 more author(s)>
    Ref: Nature, 464:367, 2010 : PubMed

            

    Title: The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization
    Cuomo CA, Guldener U, Xu JR, Trail F, Turgeon BG, Di Pietro A, Walton JD, Ma LJ, Baker SE and Kistler HC <35 more author(s)>
    Ref: Science, 317:1400, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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