Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: hetga-g5c110

Heterocephalus glaber (Naked mole rat). Arylacetamide deacetylase

Relationship
Family|Arylacetamide_deacetylase
Block| H
Position in NCBI Life Tree|Heterocephalus glaber
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Hystricomorpha: N E > Bathyergidae: N E > Heterocephalus: N E > Heterocephalus glaber: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : JH172735, XP_004834524
1 UniProt : G5C110
1 UniProt : G5C110
1 Interpro : G5C110
1 Pfam : G5C110
1 PIRSF : G5C110
1 SUPERFAM : G5C110
Sequence
Graphical view for this peptide sequence: hetga-g5c110
Colored MSA for Arylacetamide_deacetylase (raw)
MRRNSLYLLIVVVLVAFYIHGTLPGNFDEPWKLMWFNIRLKIFVHLGTFL
EFLGLYNFLDLLAVTTALNEVPPTSDENVSVIETKFDNTPVRVYVPKRKA
ETLRRAVFYIHGGGFCSGSAALHNYDLLSRWTAEKLDAVVVSCNYRLTPK
YHFPLQFEDVYNALRWFLSKNVLESYGINPEKVCVSGDSAGGNLAAAVTQ
QQLQDPDVKIKVKMQSLIYPALQAFDLDSPSYREYSHMPTLSKSLLVRLM
SEYITTDRSLERAMLSNQHVSAESSHLFKFVNWSSLLPERFRKGHIYNNP
IYGSSELSQKYPGILDVRAAPLLADDSKLRGLPLTFVLTCQCDVLRDDGL
MYVTRLRNAGVQVTHKHIEDGFHGAFALLEFKIGYRLINQYINWLKENL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRRNSLYLLIVVVLVAFYIHGTLPGNFDEPWKLMWFNIRLKIFVHLGTFL
EFLGLYNFLDLLAVTTALNEVPPTSDENVSVIETKFDNTPVRVYVPKRKA
ETLRRAVFYIHGGGFCSGSAALHNYDLLSRWTAEKLDAVVVSCNYRLTPK
YHFPLQFEDVYNALRWFLSKNVLESYGINPEKVCVSGDSAGGNLAAAVTQ
QQLQDPDVKIKVKMQSLIYPALQAFDLDSPSYREYSHMPTLSKSLLVRLM
SEYITTDRSLERAMLSNQHVSAESSHLFKFVNWSSLLPERFRKGHIYNNP
IYGSSELSQKYPGILDVRAAPLLADDSKLRGLPLTFVLTCQCDVLRDDGL
MYVTRLRNAGVQVTHKHIEDGFHGAFALLEFKIGYRLINQYINWLKENL


Reference
    Title: Genome sequencing reveals insights into physiology and longevity of the naked mole rat
    Kim EB, Fang X, Fushan AA, Huang Z, Lobanov AV, Han L, Marino SM, Sun X, Turanov AA and Gladyshev VN <26 more author(s)>
    Ref: Nature, 479:223, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer