Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: icttr-i3mk87

Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus). Abhydrolase domain containing 16A

Relationship
Family|ABHD16
Block| X
Position in NCBI Life Tree|Ictidomys tridecemlineatus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Sciuromorpha: N E > Sciuridae: N E > Xerinae: N E > Marmotini: N E > Ictidomys: N E > Ictidomys tridecemlineatus: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AGTP01099976, XP_005339052.1
1 UniProt : I3MK87
1 UniProt : I3MK87
1 Interpro : I3MK87
1 Prodom : I3MK87
1 Pfam : I3MK87
1 PIRSF : I3MK87
1 SUPERFAM : I3MK87
Sequence
Graphical view for this peptide sequence: icttr-i3mk87
Colored MSA for ABHD16 (raw)
MAKLLSCVLGPRLYKIYRERDSERAPSSVPETPTSVTNPPTSSWDTYYQP
RALEKHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYA
GTLLLLLAGVACLRGIGRWTNPQYRQFITILEATHRNQSAENKRQLANYN
FDFRSWPIDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRV
KKLPCQITSYLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG
RRAKLLACDGNEIDTMFVDRRGTAEPQGQKLVICCEGNAGFYEVGCVSTP
LEAGYSVLGWNHPGFAGSTGVPFPQNEANAMDVVVQFAIHRLGFQPQDII
IYAWSIGGFTATWAAMSYPDVSAVILDASFDDLVPLALKVMPDSWRGLVT
RTVRQHLNLNNAEQLCRYQGPVLLIRRTKDEIITTTVPEDIMSNRGNDLL
LKLLQFRYPRVMAEEGLRVVRQWLEASSQLEEASIYSRWEVEEDWCLSVL
RSYQAEHGPDFPWSVGEDMSADGRRQLALFLARKHLHNFEATHCTPLPAQ
NFQMPWHL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAKLLSCVLGPRLYKIYRERDSERAPSSVPETPTSVTNPPTSSWDTYYQP
RALEKHADSILALASVFWSISYYSSPFAFFYLYRKGYLSLSKVVPFSHYA
GTLLLLLAGVACLRGIGRWTNPQYRQFITILEATHRNQSAENKRQLANYN
FDFRSWPIDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRV
KKLPCQITSYLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG
RRAKLLACDGNEIDTMFVDRRGTAEPQGQKLVICCEGNAGFYEVGCVSTP
LEAGYSVLGWNHPGFAGSTGVPFPQNEANAMDVVVQFAIHRLGFQPQDII
IYAWSIGGFTATWAAMSYPDVSAVILDASFDDLVPLALKVMPDSWRGLVT
RTVRQHLNLNNAEQLCRYQGPVLLIRRTKDEIITTTVPEDIMSNRGNDLL
LKLLQFRYPRVMAEEGLRVVRQWLEASSQLEEASIYSRWEVEEDWCLSVL
RSYQAEHGPDFPWSVGEDMSADGRRQLALFLARKHLHNFEATHCTPLPAQ
NFQMPWHL



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer