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Gene_locus Report for: kankd-c7r9y8

Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) Putative uncharacterized protein

Relationship
Family|UCP037442
Block| X
Position in NCBI Life Tree|Kangiella koreensis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Oceanospirillales: N E > Kangiellaceae: N E > Kangiella: N E > Kangiella koreensis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP001707
1 UniProt : C7R9Y8
1 UniProt : C7R9Y8
1 Interpro : C7R9Y8
1 Pfam : C7R9Y8
1 PIRSF : C7R9Y8
1 SUPERFAM : C7R9Y8
Sequence
Graphical view for this peptide sequence: kankd-c7r9y8
Colored MSA for UCP037442 (raw)
MSYPHHNLQIQTVDGFILSASIYSAKEEPDGNTLKQNRWLIIGSAFGVPH
QYYKHIANHLAEQGISCLTFDYRGIGQSKDGVMPAKDMLMQHWGELDLES
VIQHVQNSYQPSELYYLGHSAGGQILGLAPSSYQFDKIILAATGVGAWRA
WLGAQKYLLAAMWYGLMPLMMVFQRGDFFHSKMLGPIPVPKHAVKQWVEW
AKSEDYLFTSRHGLDLSGYEKIKANIFALTISDDWYAPQSSRDALLAHYS
NSHRVTQYILPQDLELKRIGHFGLFRKKQEIIQGIWQPIIKFLNQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSYPHHNLQIQTVDGFILSASIYSAKEEPDGNTLKQNRWLIIGSAFGVPH
QYYKHIANHLAEQGISCLTFDYRGIGQSKDGVMPAKDMLMQHWGELDLES
VIQHVQNSYQPSELYYLGHSAGGQILGLAPSSYQFDKIILAATGVGAWRA
WLGAQKYLLAAMWYGLMPLMMVFQRGDFFHSKMLGPIPVPKHAVKQWVEW
AKSEDYLFTSRHGLDLSGYEKIKANIFALTISDDWYAPQSSRDALLAHYS
NSHRVTQYILPQDLELKRIGHFGLFRKKQEIIQGIWQPIIKFLNQ


Reference
    Title: Complete genome sequence of Kangiella koreensis type strain (SW-125)
    Han C, Sikorski J, Lapidus A, Nolan M, Glavina Del Rio T, Tice H, Cheng JF, Lucas S, Chen F and Detter JC <25 more author(s)>
    Ref: Stand Genomic Sci, 1:226, 2009 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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