Gene_locus Report for: klula-q6cwu7 Kluyveromyces lactis (Yeast) similar to sgd|s0002852 saccharomyces cerevisiae ydr444w
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Saccharomycotina: N E > Saccharomycetes: N E > Saccharomycetales: N E > Saccharomycetaceae: N E > Kluyveromyces: N E > Kluyveromyces lactis: N E 6_AlphaBeta_hydrolase :
klula-q6ciu6 Kluyveromyces lactis (Yeast) similar to sp|p53925 saccharomyces cerevisiae ynl115c singleton ,
klula-q6cx84 Kluyveromyces lactis (Yeast) similar to sp|p53750 saccharomyces cerevisiae ynr064c singleton .
A85-EsteraseD-FGH :
klula-q6clm1 Kluyveromyces lactis (Yeast) similar to sp|p40363 saccharomyces cerevisiae yjl068c singleton .
ABHD11-Acetyl_transferase :
klula-q6cly8 Kluyveromyces lactis (Yeast) similar to sp|p53219 saccharomyces cerevisiae ygr031w ,
klula-q6cst8 Kluyveromyces lactis (Yeast) similar to sp|p53208 saccharomyces cerevisiae ygr015c ,
klula-q6cw92 Kluyveromyces lactis (Yeast) similarities with sp|p53219 saccharomyces cerevisiae ygr031w .
abh_upf0017 :
klula-q6clz7 Kluyveromyces lactis (Yeast) acyl transferase ,
klula-q6crv8 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBR 1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica) KLLA0D06039p .
Acidic_Lipase :
klula-q6cjv9 Kluyveromyces lactis (Yeast) similar to sgd|s0004010 saccharomyces cerevisiae ylr020c .
Arb2_domain :
klula-q6cp11 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica). KLLA0E08383p .
Carboxypeptidase_S10 :
klula-q6ckk4 Kluyveromyces lactis (Yeast) carboxypeptidase ,
klula-q6cmt5 Kluyveromyces lactis (Yeast) similar to sp|p38109 saccharomyces cerevisiae ybr139w ,
klula-q6csv8 Kluyveromyces lactis (Yeast) similar to sp|p38109 saccharomyces cerevisiae ybr139w ,
klula-q6cxa3 Kluyveromyces lactis (Yeast) carboxypeptidase y .
CGI-58_ABHD5_ABHD4 :
klula-q6cjc8 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis ,
klula-q6cvd3 Kluyveromyces lactis (Yeast) similar to sp|p53264 saccharomyces cerevisiae ygr110w singleton .
Dienelactone_hydrolase :
klula-q6ckx4 Kluyveromyces lactis (Yeast) similar to sp|q07505 saccharomyces cerevisiae ydl086w singleton ,
klula-q6cy41 Kluyveromyces lactis (Yeast) similar to sp|p39721 saccharomyces cerevisiae yal049c singleton .
DPP4N_Peptidase_S9 :
klula-q6cnm1 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis ,
klula-q6crs0 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis .
Duf_676 :
klula-q6cjq9 Kluyveromyces lactis (Yeast) similar to ca|ca1159|ipf13423 candida albicans unknown function ,
klula-q6cjs1 Kluyveromyces lactis (Yeast) similar to sgd|s0005585 saccharomyces cerevisiae yor059c ,
klula-q6cn71 Kluyveromyces lactis (Yeast) similar to sp|p53118 saccharomyces cerevisiae ygl144c .
Duf_726 :
klula-q6crz9 Kluyveromyces lactis (Yeast) (Candida sphaerica) KLLA0D05159p .
Duf_1749 :
klula-q6ckd7 Kluyveromyces lactis (Yeast). protein .
FSH1 :
klula-q6ctp8 Kluyveromyces lactis (Yeast) similar to sp|p38777 saccharomyces cerevisiae yhr049w ,
klula-q6cu78 Kluyveromyces lactis (Yeast) similar to sgd|s0005806 saccharomyces cerevisiae yor280c ,
klula-q6cu79 Kluyveromyces lactis (Yeast) similar to sp|q05015 saccharomyces cerevisiae ymr222c .
Fungal_carboxylesterase_lipase :
klula-q6cr74 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis .
Homoserine_transacetylase :
klula-q6cj47 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis ,
klula-q6cuv3 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis .
Lipase_3 :
klula-q6cm48 Kluyveromyces lactis (Yeast) similar to sp|p38139 saccharomyces cerevisiae ybr204c singleton ,
klula-q6cr90 Kluyveromyces lactis (Yeast) similar to sp|p47145 saccharomyces cerevisiae yjr107w singleton ,
klula-q6cu02 Kluyveromyces lactis (Yeast) putative lipase atg15 (EC 3.1.1.3) (autophagy-related protein 15) .
LYsophospholipase_carboxylesterase :
klula-apth1 Kluyveromyces lactis (Yeast (Candida sphaerica)) similar to sgd|s0004108 saccharomyces cerevisiae ylr118c acyl-protein thioesterase 1 (EC 3.1.2.-) .
Monoglyceridelipase_lysophospholip :
klula-q6cw70 Kluyveromyces lactis (Yeast) singleton .
PC-sterol_acyltransferase :
klula-q6cl20 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis .
PGAP1 :
klula-q6cin9 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis .
PPase_methylesterase_euk :
klula-ppme1 Kluyveromyces lactis (Yeast) 1140 of kluyveromyces lactis (Candida sphaerica) protein phosphatase methylesterase 1 (EC 3.1.1.-) (pme-1) .
Steryl_acetyl_hydrolase :
klula-q6cm49 Kluyveromyces lactis (Yeast) (Candida sphaerica) KLLA0E23013p Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can
retrieve all strain data
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) Kluyveromyces lactis NRRL Y-1140:
N ,
E .
Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: klula-q6cwu7 Colored MSA for Duf_676 (raw)
MAIKLTEENDTESSDSGILLLRETGSLGIGDVNRYKIIVDKNKLLSDGIE
CTDDTLYLEFKNQESALLRPLWITGPYSIYVEITPNNYDERKQFIGDGIE
FMSDLKPDENFKAKLYLNSNARVDGTSCYAWKIDLIAQFTVVTIVRLPFV
FTLATTYKTAKHSQKDKNIEVQQTDGLKISKLDTEQLWNLPPPFPDKPVH
LVIITHGIFSSIGGDMLCLKDTIERASNFLPDDNNGNLVIRGYPGNVGKS
HKGIRHLGFKLAEYIIDTIDKLQQQFTLTRISFVGHSLGGPVQAMAIHYI
SVERPDIFDKTTGLTPVNFVAAASPFLGVIGDLPKYISIVLDIGALGQTG
RDLTLKRSYFLPSKGIVNNDGSHDRIKSKPILELLPKHPALEVFQRFKCR
TVYANVAFDGIVPLRTAALLYLDWRGLSDVQQVRSENNAQSEEGVEEQKG
SSLGEIPESSSDNKSILQWLLPQSLIKKEKYKPYVRTQTTSSVESASSDS
NNNSDSPTTFKPPKKANTLQAAASTISAPLPGMSYLVDPSSRTDRIIHDK
VYTPEELPDKHYKHKKLVKKIIYPNYSIHMKEERIARYWQETMDWRKVIV
ELQPDSHNNIIVRRRFVNSFGWIVVNHIADEHFGSKAMIE
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M A I K L T E E N D T E S S D S G I L L L R E T G S L G I G D V N R Y K I I V D K N K L L S D G I E C T D D T L Y L E F K N Q E S A L L R P L W I T G P Y S I Y V E I T P N N Y D E R K Q F I G D G I E F M S D L K P D E N F K A K L Y L N S N A R V D G T S C Y A W K I D L I A Q F T V V T I V R L P F V F T L A T T Y K T A K H S Q K D K N I E V Q Q T D G L K I S K L D T E Q L W N L P P P F P D K P V H L V I I T H G I F S S I G G D M L C L K D T I E R A S N F L P D D N N G N L V I R G Y P G N V G K S H K G I R H L G F K L A E Y I I D T I D K L Q Q Q F T L T R I S F V G H S L G G P V Q A M A I H Y I S V E R P D I F D K T T G L T P V N F V A A A S P F L G V I G D L P K Y I S I V L D I G A L G Q T G R D L T L K R S Y F L P S K G I V N N D G S H D R I K S K P I L E L L P K H P A L E V F Q R F K C R T V Y A N V A F D G I V P L R T A A L L Y L D W R G L S D V Q Q V R S E N N A Q S E E G V E E Q K G S S L G E I P E S S S D N K S I L Q W L L P Q S L I K K E K Y K P Y V R T Q T T S S V E S A S S D S N N N S D S P T T F K P P K K A N T L Q A A A S T I S A P L P G M S Y L V D P S S R T D R I I H D K V Y T P E E L P D K H Y K H K K L V K K I I Y P N Y S I H M K E E R I A R Y W Q E T M D W R K V I V E L Q P D S H N N I I V R R R F V N S F G W I V V N H I A D E H F G S K A M I E
Reference
Title: Genome evolution in yeastsDujon B , Sherman D , Fischer G , Durrens P , Casaregola S , Lafontaine I , De Montigny J , Marck C , Neuveglise C and Souciet JL <57 more author(s)> Dujon B , Sherman D , Fischer G , Durrens P , Casaregola S , Lafontaine I , De Montigny J , Marck C , Neuveglise C , Talla E , Goffard N , Frangeul L , Aigle M , Anthouard V , Babour A , Barbe V , Barnay S , Blanchin S , Beckerich JM , Beyne E , Bleykasten C , Boisrame A , Boyer J , Cattolico L , Confanioleri F , de Daruvar A , Despons L , Fabre E , Fairhead C , Ferry-Dumazet H , Groppi A , Hantraye F , Hennequin C , Jauniaux N , Joyet P , Kachouri R , Kerrest A , Koszul R , Lemaire M , Lesur I , Ma L , Muller H , Nicaud JM , Nikolski M , Oztas S , Ozier-Kalogeropoulos O , Pellenz S , Potier S , Richard GF , Straub ML , Suleau A , Swennen D , Tekaia F , Wesolowski-Louvel M , Westhof E , Wirth B , Zeniou-Meyer M , Zivanovic I , Bolotin-Fukuhara M , Thierry A , Bouchier C , Caudron B , Scarpelli C , Gaillardin C , Weissenbach J , Wincker P , Souciet JL (- 57) Ref: Nature, 430 :35, 2004 : PubMed Abstract ESTHER: Dujon_2004_Nature_430_35 PubMedSearch: Dujon 2004 Nature 430 35 PubMedID: 15229592 Gene_locus related to this paper: canga-apth1 ,
canga-ppme1 ,
canga-q6fik7 ,
canga-q6fiv5 ,
canga-q6fiw8 ,
canga-q6fj11 ,
canga-q6fjh6 ,
canga-q6fjl0 ,
canga-q6fjr8 ,
canga-q6fkj6 ,
canga-q6fkm9 ,
canga-q6fku7 ,
canga-q6fl14 ,
canga-q6flb5 ,
canga-q6fle9 ,
canga-q6flk8 ,
canga-q6fly1 ,
canga-q6fly9 ,
canga-q6fmz4 ,
canga-q6fnx4 ,
canga-q6fp28 ,
canga-q6fpa8 ,
canga-q6fpi6 ,
canga-q6fpv7 ,
canga-q6fpw6 ,
canga-q6fqj3 ,
canga-q6fr97 ,
canga-q6frt7 ,
canga-q6ftm9 ,
canga-q6ftu0 ,
canga-q6ftv9 ,
canga-q6ftz9 ,
canga-q6fuf8 ,
canga-q6fv41 ,
canga-q6fvu3 ,
canga-q6fw36 ,
canga-q6fw94 ,
canga-q6fwk6 ,
canga-q6fwm0 ,
canga-q6fxc7 ,
canga-q6fxd7 ,
debha-apth1 ,
debha-atg15 ,
debha-b5rtk1 ,
debha-b5rub4 ,
debha-b5rue8 ,
debha-b5rue9 ,
debha-bna7 ,
debha-ppme1 ,
debha-q6bgx3 ,
debha-q6bh69 ,
debha-q6bhb8 ,
debha-q6bhc1 ,
debha-q6bhd0 ,
debha-q6bhj7 ,
debha-q6bi97 ,
debha-q6biq7 ,
debha-q6bj53 ,
debha-q6bkd8 ,
debha-q6bks1 ,
debha-q6bky4 ,
debha-q6bm63 ,
debha-q6bmh3 ,
debha-q6bn89 ,
debha-q6bnj6 ,
debha-q6bp08 ,
debha-q6bpb4 ,
debha-q6bpc0 ,
debha-q6bpc6 ,
debha-q6bq10 ,
debha-q6bq11 ,
debha-q6bqd9 ,
debha-q6bqj6 ,
debha-q6br33 ,
debha-q6br93 ,
debha-q6brg1 ,
debha-q6brw7 ,
debha-q6bs23 ,
debha-q6bsc3 ,
debha-q6bsl8 ,
debha-q6bsx6 ,
debha-q6bta5 ,
debha-q6bty5 ,
debha-q6btz0 ,
debha-q6bu73 ,
debha-q6buk9 ,
debha-q6but7 ,
debha-q6bvc4 ,
debha-q6bvg4 ,
debha-q6bvg8 ,
debha-q6bvp4 ,
debha-q6bw82 ,
debha-q6bxr7 ,
debha-q6bxu9 ,
debha-q6bym5 ,
debha-q6byn7 ,
debha-q6bzj8 ,
debha-q6bzk2 ,
debha-q6bzm5 ,
klula-apth1 ,
klula-ppme1 ,
klula-q6cin9 ,
klula-q6ciu6 ,
klula-q6cj47 ,
klula-q6cjc8 ,
klula-q6cjq9 ,
klula-q6cjs1 ,
klula-q6cjv9 ,
klula-q6ckd7 ,
klula-q6ckk4 ,
klula-q6ckx4 ,
klula-q6cl20 ,
klula-q6clm1 ,
klula-q6cly8 ,
klula-q6clz7 ,
klula-q6cm48 ,
klula-q6cm49 ,
klula-q6cmt5 ,
klula-q6cn71 ,
klula-q6cnm1 ,
klula-q6cr74 ,
klula-q6cr90 ,
klula-q6crs0 ,
klula-q6crv8 ,
klula-q6crz9 ,
klula-q6cst8 ,
klula-q6csv8 ,
klula-q6ctp8 ,
klula-q6cu02 ,
klula-q6cu78 ,
klula-q6cu79 ,
klula-q6cuv3 ,
klula-q6cvd3 ,
klula-q6cw70 ,
klula-q6cw92 ,
klula-q6cwu7 ,
klula-q6cx84 ,
klula-q6cxa3 ,
klula-q6cy41 ,
yarli-apth1 ,
yarli-atg15 ,
yarli-BST1B ,
yarli-lip2 ,
yarli-LIP3 ,
yarli-LIP4 ,
yarli-LIP5 ,
yarli-LIP7 ,
yarli-LIP8 ,
yarli-lipa1 ,
yarli-ppme1 ,
yarli-q6bzp1 ,
yarli-q6bzv7 ,
yarli-q6c1f5 ,
yarli-q6c1f7 ,
yarli-q6c1r3 ,
yarli-q6c2z2 ,
yarli-q6c3h1 ,
yarli-q6c3i6 ,
yarli-q6c3l1 ,
yarli-q6c3u6 ,
yarli-q6c4h8 ,
yarli-q6c5j1 ,
yarli-q6c5m4 ,
yarli-q6c6m4 ,
yarli-q6c6p7 ,
yarli-q6c6v2 ,
yarli-q6c7h3 ,
yarli-q6c7i7 ,
yarli-q6c7j5 ,
yarli-q6c7y6 ,
yarli-q6c8m4 ,
yarli-q6c8q4 ,
yarli-q6c8u4 ,
yarli-q6c8y2 ,
yarli-q6c9r0 ,
yarli-q6c9r1 ,
yarli-q6c9u0 ,
yarli-q6c9v4 ,
yarli-q6c209 ,
yarli-q6c225 ,
yarli-q6c493 ,
yarli-q6c598 ,
yarli-q6c687 ,
yarli-q6c822 ,
yarli-q6cau6 ,
yarli-q6cax2 ,
yarli-q6caz1 ,
yarli-q6cb63 ,
yarli-q6cba7 ,
yarli-q6cbb1 ,
yarli-q6cbe6 ,
yarli-q6cby1 ,
yarli-q6ccr0 ,
yarli-q6cdg1 ,
yarli-q6cdi6 ,
yarli-q6cdv9 ,
yarli-q6ce37 ,
yarli-q6ceg0 ,
yarli-q6cep3 ,
yarli-q6cey5 ,
yarli-q6cf60 ,
yarli-q6cfp3 ,
yarli-q6cfx2 ,
yarli-q6cg13 ,
yarli-q6cg27 ,
yarli-q6cgj3 ,
yarli-q6chb8 ,
yarli-q6ci59 ,
yarli-q6c748 ,
canga-q6fpj0 ,
klula-q6cp11 ,
yarli-q6c4p0 ,
debha-q6btp5 ,
debha-kex1 Abstract
Identifying the mechanisms of eukaryotic genome evolution by comparative genomics is often complicated by the multiplicity of events that have taken place throughout the history of individual lineages, leaving only distorted and superimposed traces in the genome of each living organism. The hemiascomycete yeasts, with their compact genomes, similar lifestyle and distinct sexual and physiological properties, provide a unique opportunity to explore such mechanisms. We present here the complete, assembled genome sequences of four yeast species, selected to represent a broad evolutionary range within a single eukaryotic phylum, that after analysis proved to be molecularly as diverse as the entire phylum of chordates. A total of approximately 24,200 novel genes were identified, the translation products of which were classified together with Saccharomyces cerevisiae proteins into about 4,700 families, forming the basis for interspecific comparisons. Analysis of chromosome maps and genome redundancies reveal that the different yeast lineages have evolved through a marked interplay between several distinct molecular mechanisms, including tandem gene repeat formation, segmental duplication, a massive genome duplication and extensive gene loss.
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