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Gene_locus Report for: lepsm-a0a0k2tjb1

Lepeophtheirus salmonis (Salmon louse) Uncharacterized protein

Comment
Salmon louse


Relationship
Family|Carb_B_Arthropoda
Block| C
Position in NCBI Life Tree|Lepeophtheirus salmonis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Crustacea: N E > Maxillopoda: N E > Copepoda: N E > Neocopepoda: N E > Podoplea: N E > Siphonostomatoida: N E > Caligidae: N E > Lepeophtheirus: N E > Lepeophtheirus salmonis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 UniProt : A0A0K2TJB1
1 Interpro : A0A0K2TJB1
1 Prodom : A0A0K2TJB1
1 Pfam : A0A0K2TJB1
1 PIRSF : A0A0K2TJB1
1 SUPERFAM : A0A0K2TJB1
Sequence
Graphical view for this peptide sequence: lepsm-a0a0k2tjb1
Colored MSA for Carb_B_Arthropoda (raw)
MCRLNIFLLLILPIFTNVHINGSQEPNDRVYVKLNDKIRIAGKIERTLDN
VREFEAFKGIRYAKAPLGTLRFQDPVPEEYGGGVINAISYGSSCPQISLL
GKYIGDEDCLFLNIFVPKERKVPLPVMVFIHGGGFKQGESSEYGPDYFMN
KNNVILVTINYRLGALGFLSLGDDSISGNMGIKDQFESLKWIKEHIKSFG
GDENSITIFGSSAGGISVLTLMMAAHKVPGLFHKVISQSTPMIDAPFMHL
THNPSYYSLLFSNEMGCDSENSIDISKCLKEKDVYELINKQDMFEKFMNF
PYPWKPVVDFEYASKPLFSMGFVDLIKHGLFTNVPLLMGGTSEEGAMFSP
EFFKNDEEKFQELNENFDITGATLLMGIDEADVTDEDSATVNIINIEYLD
SDNITYSSENILKLVKMLTDVHFLGPIDKQVQLFANSSHGPIFYYNYRYK
GSHSTSIKGLDLGASHGDELFLLFKIQDISLSTEDKKMSDLLIDYWTSFA
IHGSPNSKWTPVSNAVAPKYVILNNPSSTIVAKRESYFNERMAFISSTND
IIKSYRNFDLESHPAIKSVMEREVENEEESEEELSKDEL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MCRLNIFLLLILPIFTNVHINGSQEPNDRVYVKLNDKIRIAGKIERTLDN
VREFEAFKGIRYAKAPLGTLRFQDPVPEEYGGGVINAISYGSSCPQISLL
GKYIGDEDCLFLNIFVPKERKVPLPVMVFIHGGGFKQGESSEYGPDYFMN
KNNVILVTINYRLGALGFLSLGDDSISGNMGIKDQFESLKWIKEHIKSFG
GDENSITIFGSSAGGISVLTLMMAAHKVPGLFHKVISQSTPMIDAPFMHL
THNPSYYSLLFSNEMGCDSENSIDISKCLKEKDVYELINKQDMFEKFMNF
PYPWKPVVDFEYASKPLFSMGFVDLIKHGLFTNVPLLMGGTSEEGAMFSP
EFFKNDEEKFQELNENFDITGATLLMGIDEADVTDEDSATVNIINIEYLD
SDNITYSSENILKLVKMLTDVHFLGPIDKQVQLFANSSHGPIFYYNYRYK
GSHSTSIKGLDLGASHGDELFLLFKIQDISLSTEDKKMSDLLIDYWTSFA
IHGSPNSKWTPVSNAVAPKYVILNNPSSTIVAKRESYFNERMAFISSTND
IIKSYRNFDLESHPAIKSVMEREVENEEESEEELSKDEL



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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