Gene_Locus Report

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Gene_locus Report for: lismo-metx

Listeria monocytogenes, Listeria innocua, Listeria welshimeri, Listeria marthii, Listeria seeligeri, hypothetical protein lmo0594 homoserine o-acetyltransferase (EC 2.3.1.31)

Comment
Other strains: Listeria monocytogenes (serotypes: 4a (HCC23; L99), 4b (F2365; H7858; CLIP80459); 1/2a (F6854; 08-5578; 08-5923); FSL N1-017; J2818; FSL R2-503; FSL J1-194; F6900; HPB2262; FSL N3-165; FSL J2-071; FSL F2-208), Listeria innocua (FSL S4-378; FSL J1-023; serovar 6a CLIP 11262), Listeria welshimeri serovar 6b (strain ATCC 35897/DSM 20650 SLCC5334), Listeria marthii FSL S4-120, Listeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954)


Relationship
Family|Homoserine_transacetylase
Block| X
Position in NCBI Life Tree|Listeria monocytogenes
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Listeriaceae: N E > Listeria: N E > Listeria monocytogenes: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: lismo-metx
Colored MSA for Homoserine_transacetylase (raw)
MTLQQKELFQKSPLLLENGETLSPVLVGYETYGTLSASRDNCILLEHALT
GTAHAAKHFEDDAPGWWDDYIGPGKTIDTDKYFLVCTNVFGGCSGTTGPS
SINPKTGEPFRLQFPGFSIKDIIKVQRELLEQLGVTRIVSVIGGSMGGMQ
ATEWAIDYADITDSIINIASPLAAGPDAIGYNLIMRMAILNDPDFNGGNY
VGQPEGGLATARMVGMMTYRTSELFSKRFERFTVAESSPAAFSKEHFQIE
SYLQYQGDTFVERFDANSYLYLTKAIDLFDVTAPAKDDLPAFSKIKIPYL
LIGITTDQLFRIHDLRRGYELLKEWDVPVTYHEVASEYGHDAFLVEKEVP
KFEPLIRSFLSNLPVKSI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTLQQKELFQKSPLLLENGETLSPVLVGYETYGTLSASRDNCILLEHALT
GTAHAAKHFEDDAPGWWDDYIGPGKTIDTDKYFLVCTNVFGGCSGTTGPS
SINPKTGEPFRLQFPGFSIKDIIKVQRELLEQLGVTRIVSVIGGSMGGMQ
ATEWAIDYADITDSIINIASPLAAGPDAIGYNLIMRMAILNDPDFNGGNY
VGQPEGGLATARMVGMMTYRTSELFSKRFERFTVAESSPAAFSKEHFQIE
SYLQYQGDTFVERFDANSYLYLTKAIDLFDVTAPAKDDLPAFSKIKIPYL
LIGITTDQLFRIHDLRRGYELLKEWDVPVTYHEVASEYGHDAFLVEKEVP
KFEPLIRSFLSNLPVKSI


References
6 more
    Title: Selective Discrimination of Listeria monocytogenes Epidemic Strains by a Mixed-Genome DNA Microarray Compared to Discrimination by Pulsed-Field Gel Electrophoresis, Ribotyping, and Multilocus Sequence Typing.
    Borucki MK, Kim SH, Call DR, Smole SC, Pagotto F
    Ref: J Clin Microbiol, 42:5270, 2004 : PubMed

            

    Title: Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species
    Nelson KE, Fouts DE, Mongodin EF, Ravel J, DeBoy RT, Kolonay JF, Rasko DA, Angiuoli SV, Gill SR and Fraser CM <23 more author(s)>
    Ref: Nucleic Acids Research, 32:2386, 2004 : PubMed

            

    Title: Comparative genomics of Listeria species
    Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, Baquero F, Berche P, Bloecker H, Brandt P and Cossart P <45 more author(s)>
    Ref: Science, 294:849, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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