Gene_Locus Report

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Gene_locus Report for: litct-a0a2g9rgn1

Lithobates catesbeiana (American bullfrog) (Rana catesbeiana). Uncharacterized protein

Relationship
Family|Pancreatic_lipase
Block| L
Position in NCBI Life Tree|Lithobates catesbeiana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amphibia: N E > Batrachia: N E > Anura: N E > Neobatrachia: N E > Ranoidea: N E > Ranidae: N E > Rana: N E > Aquarana: N E > Rana catesbeiana: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : KV942704
1 UniProt : A0A2G9RGN1
1 UniProt : A0A2G9RGN1
1 Interpro : A0A2G9RGN1
1 Pfam : A0A2G9RGN1
1 PIRSF : A0A2G9RGN1
1 SUPERFAM : A0A2G9RGN1
Sequence
Graphical view for this peptide sequence: litct-a0a2g9rgn1
Colored MSA for Pancreatic_lipase (raw)
EVCYNRLGCFSDDKPFAWTLQRPISRLPWSPEKINARFLLYTRENLNTYQ
EISAVKPETITASYFRKTKETRFIIHGFTDNGEGEWLSDMCKAMLQVEDV
NCICVDWHGGSVALYTQASNNIRVVGAEDIFNYLLSNVHLIGHSLGAHTA
GEAGKRLPGIGRITGLDPAQPYFQDTPIEVRLDPSDALLVDVIHTDASPM
LLNLGTGGYGMSQIVGHLDFFPNGGKQMPGCQKSQIFKSPNIDDILDVTS
ELVACNHIRSTKYYTQTILTPDGYLGYSAASYDAFQQGAGFPCPSKGCPM
MGHYADRYSGITSASQIFYLNTGDLKVFSRWRYQITVYTSGSLAVLGSFS
VSLEGSNGKTKDYTLYRGFIKTGTSYTAFIDAEINVGQISKVTFVWNGVV
FGNVRLGASSVTVQSGKDGATYSFCSSASVSPGNPQILSLC
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

EVCYNRLGCFSDDKPFAWTLQRPISRLPWSPEKINARFLLYTRENLNTYQ
EISAVKPETITASYFRKTKETRFIIHGFTDNGEGEWLSDMCKAMLQVEDV
NCICVDWHGGSVALYTQASNNIRVVGAEDIFNYLLSNVHLIGHSLGAHTA
GEAGKRLPGIGRITGLDPAQPYFQDTPIEVRLDPSDALLVDVIHTDASPM
LLNLGTGGYGMSQIVGHLDFFPNGGKQMPGCQKSQIFKSPNIDDILDVTS
ELVACNHIRSTKYYTQTILTPDGYLGYSAASYDAFQQGAGFPCPSKGCPM
MGHYADRYSGITSASQIFYLNTGDLKVFSRWRYQITVYTSGSLAVLGSFS
VSLEGSNGKTKDYTLYRGFIKTGTSYTAFIDAEINVGQISKVTFVWNGVV
FGNVRLGASSVTVQSGKDGATYSFCSSASVSPGNPQILSLC


Reference
    Title: The North American bullfrog draft genome provides insight into hormonal regulation of long noncoding RNA
    Hammond SA, Warren RL, Vandervalk BP, Kucuk E, Khan H, Gibb EA, Pandoh P, Kirk H, Zhao Y and Birol I <11 more author(s)>
    Ref: Nat Commun, 8:1433, 2017 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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