Gene_Locus Report

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Gene_locus Report for: lodel-a5dw16

Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus) Putative uncharacterized protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Lodderomyces elongisporus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Saccharomycotina: N E > Saccharomycetes: N E > Saccharomycetales: N E > Debaryomycetaceae: N E > Candida/Lodderomyces clade: N E > Lodderomyces: N E > Lodderomyces elongisporus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CH981525
1 UniProt : A5DW16
1 UniProt : A5DW16
1 Interpro : A5DW16
1 Pfam : A5DW16
1 PIRSF : A5DW16
1 SUPERFAM : A5DW16
Sequence
Graphical view for this peptide sequence: lodel-a5dw16
Colored MSA for abh_upf0017 (raw)
MGILNWGFRSTIKVHQSSPQDSIIVSPERISSPDSKDVEKQDSTAVKFTD
FTKTLELIDPSKKLWLNPLLFNGSLQTLYYTSIDVSNKFKIWYGRELFHY
SDGGSSSLDWVIPEPDSVEEFKKLGTETLPEGYPKLHPRTRYLSNDEAEA
INKADDLKTTPIVVILHGLGGGSHEPLIRNFAEVIDKNTNGWDVVVVNNR
GCCRTKITSNKVFNAGSTNDIREVLQKFKKQWPNRPIFVTGFSFGAALLS
NFLGEEGEKADLEKSEDSKHTERLVAAACAVGCPWDFVDSAYHIQNSLTG
RMLLNPALAKFLAKIVTNNYAELKELNPELVNDQTMKELKNIKTTWQFDD
LITCKLTPYKNAFEYYRELSPIRKILKIKTPYLILNSTDDPAVGCRLPIL
DAKTNPYLCLVETDMGGHLGYVQTSGEFWCVKVVEEFLQKFAEL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MGILNWGFRSTIKVHQSSPQDSIIVSPERISSPDSKDVEKQDSTAVKFTD
FTKTLELIDPSKKLWLNPLLFNGSLQTLYYTSIDVSNKFKIWYGRELFHY
SDGGSSSLDWVIPEPDSVEEFKKLGTETLPEGYPKLHPRTRYLSNDEAEA
INKADDLKTTPIVVILHGLGGGSHEPLIRNFAEVIDKNTNGWDVVVVNNR
GCCRTKITSNKVFNAGSTNDIREVLQKFKKQWPNRPIFVTGFSFGAALLS
NFLGEEGEKADLEKSEDSKHTERLVAAACAVGCPWDFVDSAYHIQNSLTG
RMLLNPALAKFLAKIVTNNYAELKELNPELVNDQTMKELKNIKTTWQFDD
LITCKLTPYKNAFEYYRELSPIRKILKIKTPYLILNSTDDPAVGCRLPIL
DAKTNPYLCLVETDMGGHLGYVQTSGEFWCVKVVEEFLQKFAEL


Reference
    Title: Evolution of pathogenicity and sexual reproduction in eight Candida genomes
    Butler G, Rasmussen MD, Lin MF, Santos MA, Sakthikumar S, Munro CA, Rheinbay E, Grabherr M, Forche A and Cuomo CA <41 more author(s)>
    Ref: Nature, 459:657, 2009 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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