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Gene_locus Report for: marav-a1u5n0

Marinobacter aquaeolei (Marinobacter hydrocarbonoclasticus), Alcanivorax borkumensis, EH92 Alpha/beta hydrolase fold protein

Comment
EH92 promiscuous activity 12/96 substrates Martinez-Martinez et al. 2018 ; Other strains: Marinobacter hydrocarbonoclasticus VT8; Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) , CE12 in Bollinger et al. 2020


Relationship
Family|Carbon-carbon_bond_hydrolase
Block| X
Position in NCBI Life Tree|Marinobacter hydrocarbonoclasticus VT8
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Alteromonadales: N E > Alteromonadaceae: N E > Marinobacter: N E > Marinobacter hydrocarbonoclasticus: N E > Marinobacter hydrocarbonoclasticus VT8: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 2 more: KR107276, CP000514, AM286690
2 UniProt : A1U5N0, Q0VRT2
2 UniProt : A1U5N0, Q0VRT2
2 Interpro : A1U5N0, Q0VRT2
2 Prodom : A1U5N0, Q0VRT2
2 Pfam : A1U5N0, Q0VRT2
2 PIRSF : A1U5N0, Q0VRT2
2 SUPERFAM : A1U5N0, Q0VRT2
Sequence
Graphical view for this peptide sequence: marav-a1u5n0
Colored MSA for Carbon-carbon_bond_hydrolase (raw)
MEPLELEDQFVTTEAGYQLHYQSAGTGEPLIFLHGGGPGATSFGNFYYNA
PAFLEQYQCFFYNMPGYGQSSKLVVEAPMYSFHASMLAEFMDLVGIPRAH
LVCQSFGGCAAIKLAIDHPERVNKLVLMGAQPMFGGVIDPLKLMSKHAAN
IILDYYGGEGPTPEKMRRLLADYEMHDDSKLTDWTVNDRFANSTDPELLE
VVRTPGFMGQPESLLGDLHRNVVPTLCLWGLHDWFGGPDVPLLFLNQFAN
AQLFIEGQGAHHWQTELPERFNRVVLSYLSE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEPLELEDQFVTTEAGYQLHYQSAGTGEPLIFLHGGGPGATSFGNFYYNA
PAFLEQYQCFFYNMPGYGQSSKLVVEAPMYSFHASMLAEFMDLVGIPRAH
LVCQSFGGCAAIKLAIDHPERVNKLVLMGAQPMFGGVIDPLKLMSKHAAN
IILDYYGGEGPTPEKMRRLLADYEMHDDSKLTDWTVNDRFANSTDPELLE
VVRTPGFMGQPESLLGDLHRNVVPTLCLWGLHDWFGGPDVPLLFLNQFAN
AQLFIEGQGAHHWQTELPERFNRVVLSYLSE


References
1 more
    Title: Organic-Solvent-Tolerant Carboxylic Ester Hydrolases for Organic Synthesis
    Bollinger A, Molitor R, Thies S, Koch R, Coscolin C, Ferrer M, Jaeger KE
    Ref: Applied Environmental Microbiology, 86:e00106, 2020 : PubMed

            

    Title: Determinants and prediction of esterase substrate promiscuity patterns
    Martinez-Martinez M, Coscolin C, Santiago G, Chow J, Stogios PJ, Bargiela R, Gertler C, Navarro-Fernandez J, Bollinger A and Ferrer M <32 more author(s)>
    Ref: ACS Chemical Biology, 13:225, 2018 : PubMed

            

    Title: Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis
    Schneiker S, Martins dos Santos VA, Bartels D, Bekel T, Brecht M, Buhrmester J, Chernikova TN, Denaro R, Ferrer M and Golyshin PN <20 more author(s)>
    Ref: Nat Biotechnol, 24:997, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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